RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TFAP2DQ7Z6R9 452 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TTC7BQ86TV6 843 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ZCCHC9Q8N567 271 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 BEND7Q8N7W2 519 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 OR13F1Q8NGS4 319 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RPLP0P6Q8NHW5 317 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CFAP36Q96G28 342 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 MCCC1Q96RQ3 725 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CYTH2Q99418 400 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 EFHD1Q9BUP0 239 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ERVMER34-1Q9H9K5 563 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ANAPC5Q9UJX4 755 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 GAPDHSO14556 408 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SLC7A4O43246 635 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PRPSAP2O60256 369 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SEC14L2O76054 403 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 TRAPPC2P0DI81 140 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 TRAPPC2BP0DI82 140 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PRKACAP17612 351 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 TACR2P21452 398 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 TALDO1P37837 337 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 HERC3Q15034 1050 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PDK1Q15118 436 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 CA9Q16790 459 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 HNRNPA1L2Q32P51 320 aaKnown RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 YIF1BQ5BJH7 314 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 FAM205BPQ63HN1 556 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 UGT3A1Q6NUS8 523 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 RANBP10Q6VN20 620 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 MFSD2AQ8NA29 543 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 GRK7Q8WTQ7 553 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 RTP4Q96DX8 246 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 MAP6Q96JE9 813 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SERPINB11Q96P15 392 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 WWP1Q9H0M0 922 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 DTLQ9NZJ0 730 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PKD2L2Q9NZM6 624 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SAE1Q9UBE0 346 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 TBK1Q9UHD2 729 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 ST14Q9Y5Y6 855 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 H7C0C1 242 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SLC30A4O14863 429 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 ADAM11O75078 769 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 GOT2P00505 430 aaKnown RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PRLP01236 227 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 CASP3P42574 277 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 ATP5OP48047 213 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 CSRP3P50461 194 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 CCR5P51681 352 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 CDH6P55285 790 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 IFITM3Q01628 133 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF33AQ06730 810 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SLC10A2Q12908 348 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PPP1R2P3Q6NXS1 205 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 MFSD7Q6UXD7 560 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 POLNQ7Z5Q5 900 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 DEFB106AQ8N104 65 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PARP8Q8N3A8 854 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 PACRGLQ8N7B6 248 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 SH3KBP1Q96B97 665 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 EID2BQ96D98 161 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 RMND5BQ96G75 393 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF578Q96N58 590 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-204ENST00000369530 MCMBPQ9BTE3 642 aa6.76□□□□□ -1.33
CSDE1-204ENST00000369530 A0A1B0GTW7 788 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 FOXO6A8MYZ6 492 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MTSS1O43312 755 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MAFKO60675 156 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SNNO75324 88 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SPAG6O75602 509 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SLITRK5O94991 958 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TRUB2O95900 331 aaKnown RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PAHP00439 452 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 HMGN1P05114 100 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SRCP12931 536 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MYF6P23409 242 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PTGS2P35354 604 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 HAAOP46952 286 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PSMD8P48556 350 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 NUMBP49757 651 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PDX1P52945 283 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF284Q2VY69 593 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MPPE1Q53F39 396 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TEX44Q53QW1 395 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PITRM1Q5JRX3 1037 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 FGD3Q5JSP0 725 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TAS2R42Q7RTR8 314 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ABI3BPQ7Z7G0 1075 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 NLRP8Q86W28 1048 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TBC1D21Q8IYX1 336 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 LINC00518Q8N0U6 118 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 WFIKKN2Q8TEU8 576 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 RNF170Q96K19 258 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms