RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 OR8K5Q8NH50 307 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 HM13Q8TCT9 377 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 ZFPM2Q8WW38 1151 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 CPT1BQ92523 772 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 RBM41Q96IZ5 413 aaKnown RBP10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LINC00615Q96LM1 132 aaPredicted RBP10.06□□□□□ -0.8
CLRN3-201ENST00000368671 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 SLC7A5P2Q9GIP4 190 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LUZP4Q9P127 313 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 POMT2Q9UKY4 750 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 TFR2Q9UP52 801 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 BTRCQ9Y297 605 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 C5orf60A6NFR6 353 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 TMEM150CB9EJG8 249 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 AKR1B15C9JRZ8 316 aaPredicted RBP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 MEN1O00255 615 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF185O15231 689 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 TMEM63AO94886 807 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CRTAMO95727 393 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 RALBP11234 206 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CYP2A7P20853 494 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PSMB4P28070 264 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PREPP48147 710 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 LMAN1P49257 510 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PRLHRP49683 370 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 HADHBP55084 474 aaKnown RBP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 GSDMDP57764 484 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 XIAPP98170 497 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PRPSAP1Q14558 356 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PLEKHS1Q5SXH7 462 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 HIST2H2BCQ6DN03 193 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CNGA4Q8IV77 575 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CARFQ8N187 725 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 ACVR1CQ8NER5 493 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 OR1L3Q8NH93 324 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 LCN9Q8WX39 176 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 KRT35Q92764 455 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 ULK4Q96C45 1275 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 LRFN5Q96NI6 719 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 NRTNQ99748 197 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 FAM118BQ9BPY3 351 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 FERMT1Q9BQL6 677 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 CCM2Q9BSQ5 444 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 KLHL25Q9H0H3 589 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 SRMSQ9H3Y6 488 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 ACTR5Q9H9F9 607 aaPredicted RBP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 C1GALT1Q9NS00 363 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 PCDHGA9Q9Y5G4 932 aaKnown RBP10.05□□□□□ -0.8
CLRN3-201ENST00000368671 HEBP2Q9Y5Z4 205 aa10.05□□□□□ -0.8
CLRN3-201ENST00000368671 UBR5O95071 2799 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 CCDC66A2RUB6 948 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 A6NL46 340 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 MATN2O00339 956 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 IFRD1O00458 451 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 BTN3A3O00478 584 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 BTN3A1O00481 513 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 CCL22O00626 93 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 KCNN4O15554 427 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 APOC2P02655 101 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 RAB40ALP0C0E4 278 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 PYGMP11217 842 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ATP1B2P14415 290 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 PVRP15151 417 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ST6GAL1P15907 406 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ITGALP20701 1170 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 CTNNA2P26232 953 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 MC4RP32245 332 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ADRA1AP35348 466 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 RORAP35398 523 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 PTCHD3Q3KNS1 767 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 PRR30Q53SZ7 412 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ANKRD20A2Q5SQ80 823 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ANKRD20A1Q5TYW2 823 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF517Q6ZMY9 492 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 BBS12Q6ZW61 710 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 CDKL3Q8IVW4 592 aaPredicted RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 SYTL1Q8IYJ3 562 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 NXPE1Q8N323 547 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 PHC3Q8NDX5 983 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 FDCSPQ8NFU4 85 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 OR52E1Q8NGJ3 308 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 COPS8Q99627 209 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 NLNQ9BYT8 704 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 COG4Q9H9E3 785 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms