RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 DCAKDQ8WVC6 231 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 EEF1AKMT1Q8WVE0 214 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 SLC38A3Q99624 504 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 GPR22Q99680 433 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 SYNDIG1Q9H7V2 258 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 NCKIPSDQ9NZQ3 722 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 ASF1AQ9Y294 204 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 NFS1Q9Y697 457 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 LAMA1P25391 3075 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 CASC3O15234 703 aaKnown RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 ERLIN1O75477 346 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 ACADLP28330 430 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 GMPRP36959 345 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 SLCO1A2P46721 670 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 POU4F1Q01851 419 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 RAPH1Q70E73 1250 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 PIWIL4Q7Z3Z4 852 aaKnown RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 CMC1Q7Z7K0 106 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 ZBTB9Q96C00 473 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 LINGO1Q96FE5 620 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 TSPAN17Q96FV3 270 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 RTKNQ9BST9 563 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 TBK1Q9UHD2 729 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 CIDEBQ9UHD4 219 aa13.56□□□□□ -0.24
TPM3-211ENST00000368531 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
TPM3-211ENST00000368531 PCNX2A6NKB5 2137 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 RP1P56715 2156 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 TLDC2A0PJX2 215 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 HMX2A2RU54 273 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 CTIFO43310 598 aaKnown RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 STMN1P16949 149 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 SDHBP21912 280 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 ACP1P24666 158 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 GCAP28676 217 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 BDKRB1P46663 353 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 FASLGP48023 281 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 ACADVLP49748 655 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 RGS4P49798 205 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 SERPINB9P50453 376 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 OR1D5P58170 312 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 IL2P60568 153 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 SIM1P81133 766 aaPredicted RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 IFFO1Q0D2I5 559 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 GBX1Q14549 363 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 PLCL1Q15111 1095 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 AMZ1Q400G9 498 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 TMEM207Q6UWW9 146 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 EPS8L3Q8TE67 593 aaKnown RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 NAT6Q93015 286 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 FOPNLQ96NB1 174 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 NRTNQ99748 197 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 TBC1D10AQ9BXI6 508 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 UNKQ9C0B0 810 aaKnown RBP13.55□□□□□ -0.24
TPM3-211ENST00000368531 GPAMQ9HCL2 828 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 POT1Q9NUX5 634 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 KLHL42Q9P2K6 505 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 CTNNAL1Q9UBT7 734 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 HEBP2Q9Y5Z4 205 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 COLEC10Q9Y6Z7 277 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 ANKRD12Q6UB98 2062 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 DMDP11532 3685 aa13.55□□□□□ -0.24
TPM3-211ENST00000368531 KRT87PA6NCN2 255 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 TRIM49D1C9J1S8 452 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 B4GAT1O43505 415 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 NUDT21O43809 227 aaKnown RBP13.54□□□□□ -0.24
TPM3-211ENST00000368531 KRT38O76015 456 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 KCNK5O95279 499 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 MPC1LP0DKB6 136 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CBSLP0DN79 551 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CEACAM1P13688 526 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CD9P21926 228 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CBSP35520 551 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 RAB10P61026 200 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CCL7P80098 99 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
TPM3-211ENST00000368531 GPR18Q14330 331 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
TPM3-211ENST00000368531 NKAIN2Q5VXU1 208 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 ADGRD1Q6QNK2 874 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 TMEM26Q6ZUK4 368 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 SPATA6LQ8N4H0 392 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 MREGQ8N565 214 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 AVL9Q8NBF6 648 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms