RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 C11orf96Q7Z7L8 435 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 GPR150Q8NGU9 434 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SPATA22Q8NHS9 363 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 TEKT5Q96M29 485 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 VAT1Q99536 393 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 FSD1LQ9BXM9 530 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SLC29A3Q9BZD2 475 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
MRPL55-209ENST00000366735 LATS2Q9NRM7 1088 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SMOXQ9NWM0 555 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SOHLH2Q9NX45 425 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 KLHL8Q9P2G9 620 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-209ENST00000366735 PCYOX1Q9UHG3 505 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 PCDHGA9Q9Y5G4 932 aaKnown RBP12.11□□□□□ -0.47
MRPL55-209ENST00000366735 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
MRPL55-209ENST00000366735 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
MRPL55-209ENST00000366735 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 OR2AG2A6NM03 316 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 POP7O75817 140 aaKnown RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 TJP3O95049 919 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 EPOP01588 193 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 PTPN3P26045 913 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 NDUFS1P28331 727 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 TNFRSF8P28908 595 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 PBLDP30039 288 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 DYNLT1P63172 113 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 MPP3Q13368 585 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 KRT33BQ14525 404 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 DRICH1Q6PGQ1 229 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 NPNTQ6UXI9 565 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 KLHL7Q8IXQ5 586 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 BLOC1S5Q8TDH9 187 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 CPT1BQ92523 772 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 SLCO2A1Q92959 643 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 MR1Q95460 341 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 C12orf66Q96MD2 445 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 MAP3K3Q99759 626 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 FRMD8P1Q9BZ68 369 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 ARGLU1Q9NWB6 273 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 UBP1Q9NZI7 540 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 ACSL5Q9ULC5 683 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 WDR37Q9Y2I8 494 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 ZNF451Q9Y4E5 1061 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 SPO11Q9Y5K1 396 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 PCM1Q15154 2024 aa12.1□□□□□ -0.47
MRPL55-209ENST00000366735 SPTBN1Q01082 2364 aaKnown RBP12.1□□□□□ -0.47
MRPL55-209ENST00000366735 LOC285095A0A1B0GVY8 99 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 AURKAO14965 403 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 RAD51CO43502 376 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 DPM1O60762 260 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 TIAF1O95411 115 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 RALBP11234 206 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 FOLR1P15328 257 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 NFKB1P19838 968 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-209ENST00000366735 WNT3AP56704 352 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 PPP1CAP62136 330 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 NFE2L1Q14494 772 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 KCNAB1Q14722 419 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 CCNG2Q16589 344 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 GPRC6AQ5T6X5 926 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 IZUMO3Q5VZ72 239 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 TMEM220Q6QAJ8 160 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 RASGEF1AQ8N9B8 481 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 P3H4Q92791 437 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
MRPL55-209ENST00000366735 LRRC45Q96CN5 670 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 LRFN5Q96NI6 719 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 SLC7A5P2Q9GIP4 190 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 KIR3DX1Q9H7L2 352 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 IL26Q9NPH9 171 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 IL17CQ9P0M4 197 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-209ENST00000366735 SNX7Q9UNH6 387 aa12.09□□□□□ -0.47
MRPL55-209ENST00000366735 FARSAQ9Y285 508 aaKnown RBP12.09□□□□□ -0.47
MRPL55-209ENST00000366735 ICE1Q9Y2F5 2266 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms