RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 C2CD4AQ8NCU7 369 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 TP53INP1Q96A56 240 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 RANBP9Q96S59 729 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 MINDY3Q9H8M7 445 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 CREG1O75629 220 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 STK16O75716 305 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 DIRAS1O95057 198 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 MAGEA6P43360 314 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PFKPQ01813 784 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 APOFQ13790 326 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 FBXO43Q4G163 708 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ELMOD2Q8IZ81 293 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 OR13J1Q8NGT2 312 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 TRNT1Q96Q11 434 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 DSN1Q9H410 356 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ADARB2Q9NS39 739 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 KERAO60938 352 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 OGNP20774 298 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 OR4D2P58180 307 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 RPS14P62263 151 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ACOX1Q15067 660 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 TRIM40Q6P9F5 258 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 OR8H3Q8N146 312 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF671Q8TAW3 534 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 GTPBP3Q969Y2 492 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 MFSD1Q9H3U5 465 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PAQR5Q9NXK6 330 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 KCNH4Q9UQ05 1017 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PTGDR2Q9Y5Y4 395 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ERN1O75460 977 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 HPRP00739 348 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 G6PDP11413 515 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 SP2Q02086 613 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 GALNT2Q10471 571 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 CAMK2GQ13555 558 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PDE12Q6L8Q7 609 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PLOD2O00469 737 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 CDK14O94921 469 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 NPPAP01160 153 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 DCKP27707 260 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 PBLDP30039 288 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 HCAR3P49019 387 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 HMGCS1Q01581 520 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 CCL15Q16663 113 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC36A3Q495N2 470 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 RETSATQ6NUM9 610 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 HFE2Q6ZVN8 426 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 MAVSQ7Z434 540 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 DPP10Q8N608 796 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 C11orf65Q8NCR3 313 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 BTN2A2Q8WVV5 523 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 TMEM159Q96B96 161 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF486Q96H40 463 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 ANKRA2Q9H9E1 313 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 TMEM181Q9P2C4 612 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 MALT1Q9UDY8 824 aa15.72■□□□□ 0.11
CLSTN1-201ENST00000361311 TRBC1P01850 177 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 FUCA1P04066 466 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 ALDH7A1P49419 539 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 LILRA4P59901 499 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 LGALS3BPQ08380 585 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 CD47Q08722 323 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 SMARCB1Q12824 385 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 B3GNT9Q6UX72 402 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 SIDT2Q8NBJ9 832 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 ZFP90Q8TF47 636 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 ACDQ96AP0 544 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 KCNC2Q96PR1 638 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 INTS7Q9NVH2 962 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 FPR1P21462 350 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 THPOP40225 353 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 GABARAPL2P60520 117 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 TRIM71Q2Q1W2 868 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 C9orf43Q8TAL5 461 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC38A4Q969I6 547 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 NLNQ9BYT8 704 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 POLR2J2Q9GZM3 115 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 HSPB11Q9Y547 144 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 ZCWPW2A0A1B0GU75 182 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 I3L521 148 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 PPEF2O14830 753 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 AQP9O43315 295 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 CD72P21854 359 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 CPTPQ5TA50 214 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 PRR23CQ6ZRP0 262 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 CRYBG2Q8N1P7 616 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 RAB42Q8N4Z0 105 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 RTL3Q8N8U3 475 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 OR13C4Q8NGS5 318 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 BRSK1Q8TDC3 778 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 GTF3C2Q8WUA4 911 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 TCF25Q9BQ70 676 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 OSBPL10Q9BXB5 764 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 C12orf4Q9NQ89 552 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 AGPAT4Q9NRZ5 378 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 KLHL28Q9NXS3 571 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 CPA4Q9UI42 421 aa15.71■□□□□ 0.11
CLSTN1-201ENST00000361311 ZSCAN5BA6NJL1 495 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms