RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 CCDC117Q8IWD4 279 aaPredicted RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 GJD3Q8N144 294 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 SFRP1Q8N474 314 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ZNF276Q8N554 614 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CAMKK1Q8N5S9 505 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 JOSD2Q8TAC2 188 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DEPDC1BQ8WUY9 529 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 GATAD2BQ8WXI9 593 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ART4Q93070 314 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 TRIM63Q969Q1 353 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ELSPBP1Q96BH3 223 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ZNF486Q96H40 463 aaPredicted RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PIWIL1Q96J94 861 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 TRIM51Q9BSJ1 452 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DHRS4Q9BTZ2 278 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 SORBS1Q9BX66 1292 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 KLF16Q9BXK1 252 aaPredicted RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 HOXD1Q9GZZ0 328 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CLPBQ9H078 707 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 KLHL25Q9H0H3 589 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 KCNK12Q9HB15 430 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DUS2Q9NX74 493 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ANAPC7Q9UJX3 599 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 RBMX2Q9Y388 322 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CFAP99D6REC4 459 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 RNF103O00237 685 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 TXNDC9O14530 226 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 JRKO75564 520 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PRLP01236 227 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 IL1BP01584 269 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PROCP04070 461 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 BMP1P13497 986 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 HSD3B1P14060 373 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CHRNA3P32297 505 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 TRHRP34981 398 aaPredicted RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CLK3P49761 638 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 GDI2P50395 445 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 EIF3EP60228 445 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 STX1BP61266 288 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 RPL7AP62424 266 aaKnown RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 SELENBP1Q13228 472 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ATP1A4Q13733 1029 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PCBP2Q15366 365 aaKnown RBP eCLIP4.89□□□□□ -1.632e-6■■■■■ 27.2
PDE4D-205ENST00000360047 SLC25A52Q3SY17 297 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 C1orf146Q5VVC0 180 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CENPUQ71F23 418 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 KRT74Q7RTS7 529 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 THAP5Q7Z6K1 395 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 TAC4Q86UU9 113 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DENND1CQ8IV53 801 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 MFSD6LQ8IWD5 586 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PRR18Q8N4B5 295 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 GPR156Q8NFN8 814 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 ZNF564Q8TBZ8 553 aaPredicted RBP4.89□□□□□ -1.63
PDE4D-205ENST00000360047 HPS1Q92902 700 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 FGF14Q92915 247 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PLD4Q96BZ4 506 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 KCNC2Q96PR1 638 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 VPS35Q96QK1 796 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DOK1Q99704 481 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CNPY3Q9BT09 278 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 RBCK1Q9BYM8 510 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 SLC35C2Q9NQQ7 365 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DIABLOQ9NR28 239 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 STMN3Q9NZ72 180 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 PCYOX1Q9UHG3 505 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 VPS51Q9UID3 782 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 RPS6KA6Q9UK32 745 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 CCL26Q9Y258 94 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DTNAQ9Y4J8 743 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 DOCK6Q96HP0 2047 aa4.89□□□□□ -1.63
PDE4D-205ENST00000360047 LAMA2P24043 3122 aaKnown RBP4.88□□□□□ -1.63
PDE4D-205ENST00000360047 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 H0YAE9 185 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 H0YJX3 145 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 POLR1CO15160 346 aaPredicted RBP4.88□□□□□ -1.63
PDE4D-205ENST00000360047 LDLRAD4O15165 306 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 SHOXO15266 292 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
PDE4D-205ENST00000360047 NUAK1O60285 661 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A9O60656 530 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
PDE4D-205ENST00000360047 IFNA14P01570 189 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 CYBBP04839 570 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 CREB1P16220 341 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A6P19224 532 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A1P22309 533 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A4P22310 534 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A3P35503 534 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 UGT1A5P35504 534 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 SLC26A3P40879 764 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 PTGIRP43119 386 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 PRIM2P49643 509 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 DNA2P51530 1060 aa4.88□□□□□ -1.63
PDE4D-205ENST00000360047 ZNF143P52747 638 aaPredicted RBP4.88□□□□□ -1.63
PDE4D-205ENST00000360047 KCNJ10P78508 379 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms