RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TMEFF2Q9UIK5 374 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 ST3GAL5Q9UNP4 418 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 hCG_2039718K7EN88 272 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 TULP3O75386 442 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 HOXC13P31276 330 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 SLC26A3P40879 764 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 HSPA7P48741 367 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF135P52742 658 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 FAM189BP81408 668 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 AFMIDQ63HM1 303 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 AGMOQ6ZNB7 445 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 Q6ZPB1 254 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 AHSA2Q719I0 299 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 BEND5Q7L4P6 421 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 SPATA2LQ8IUW3 424 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 MSRB3Q8IXL7 192 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 POC5Q8NA72 575 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF540Q8NDQ6 660 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF548Q8NEK5 533 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 RHBDF1Q96CC6 855 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 UGT2B28Q9BY64 529 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 ZBTB20Q9HC78 741 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-203ENST00000356147 SYTL2Q9HCH5 934 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 PCDHGA10Q9Y5H3 936 aa9.96□□□□□ -0.81
PTPRA-203ENST00000356147 LOC285095A0A1B0GVY8 99 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 LCHNA4D1U4 455 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 CXCL11O14625 94 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 RAMP2O60895 175 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 VPS4BO75351 444 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 LRATO95237 230 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 EFNA1P20827 205 aaPredicted RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TBX4P57082 545 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 DMPKQ09013 629 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 PWP1Q13610 501 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 MAPKAPK3Q16644 382 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 SLC39A12Q504Y0 691 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 CARD16Q5EG05 197 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 CES5AQ6NT32 575 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 MSANTD2Q6P1R3 559 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 EID3Q8N140 333 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TMEM86AQ8N2M4 240 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 OR7D4Q8NG98 312 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 SLC13A3Q8WWT9 602 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 RBM4BQ9BQ04 359 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 RBM4Q9BWF3 364 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 APOL5Q9BWW9 433 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ZYG11BQ9C0D3 744 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 DERL2Q9GZP9 239 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ZIM2Q9NZV7 527 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TRMT6Q9UJA5 497 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 RALGAPA2Q2PPJ7 1873 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ELOVL7A1L3X0 281 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TYW5A2RUC4 315 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 E5RI56 91 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 F2P00734 622 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 DBTP11182 482 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ITIH1P19827 911 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 SERPINB1P30740 379 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 CYP2C18P33260 490 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ARPP19P56211 112 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 EPS8Q12929 822 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 CLCA4Q14CN2 919 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 UPP1Q16831 310 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 DGUOKQ16854 277 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF691Q5VV52 312 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 GLT6D1Q7Z4J2 308 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 PLD3Q8IV08 490 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 SYTL1Q8IYJ3 562 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 MDGA1Q8NFP4 955 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 OR6Q1Q8NGQ2 317 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TINF2Q9BSI4 451 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 NSUN3Q9H649 340 aaKnown RBP9.96□□□□□ -0.82
PTPRA-203ENST00000356147 SPATA7Q9P0W8 599 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 C3orf18Q9UK00 162 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 ABCG2Q9UNQ0 655 aa9.96□□□□□ -0.82
PTPRA-203ENST00000356147 TTC34A8MYJ7 566 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PFDN6O15212 129 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 GABARAPO95166 117 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PGLSO95336 258 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 TSPAN12O95859 305 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 DNTTP04053 509 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ODC1P11926 461 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 IGFBP5P24593 272 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 CD40LGP29965 261 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 SUOXP51687 545 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MTA1Q13330 715 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 HIST2H2ACQ16777 129 aaPredicted RBP9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ATAD3BQ5T9A4 648 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 AGAP7PQ5VUJ5 663 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 FRA10AC1Q70Z53 315 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 LPCAT1Q8NF37 534 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MCFD2Q8NI22 146 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms