RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FOXK1P85037 733 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 RASGEF1CQ8N431 466 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TSTD1Q8NFU3 115 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 MMADHCQ9H3L0 296 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ABCD2Q9UBJ2 740 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 MEMO1Q9Y316 297 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TELO2Q9Y4R8 837 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 REM1O75628 298 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 PPM1BO75688 479 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 CYP1A2P05177 515 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 NOGQ13253 232 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 DPYSQ14117 519 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 VTCN1Q7Z7D3 282 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ADAD1Q96M93 576 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 KCTD5Q9NXV2 234 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TRAF6Q9Y4K3 522 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 MAP1BP46821 2468 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 CLDN9O95484 217 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ANXA4P09525 319 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 SLC26A5P58743 744 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 HGSNATQ68CP4 663 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 OGFOD2Q6N063 350 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 NXF3Q9H4D5 531 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 PCDH18Q9HCL0 1135 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TREM1Q9NP99 234 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ADAP2Q9NPF8 381 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 CCNKO75909 580 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 GSTT1P30711 240 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 RPS9P46781 194 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 INHBEP58166 350 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TMEM17Q86X19 198 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 JAGN1Q8N5M9 183 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 HCN2Q9UL51 889 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF638Q14966 1978 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TNFP01375 233 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 APLP1P51693 650 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 OLR1P78380 273 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TIGD2Q4W5G0 525 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TTMPQ5BVD1 217 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF676Q8N7Q3 588 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 SVILO95425 2214 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 SLITRK3O94933 977 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
COL27A1-201ENST00000356083 UROSP10746 265 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 IRF2P14316 349 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 TMPPEQ6ZT21 453 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 B4GALT2O60909 372 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 CPN2P22792 545 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 MLLT1Q03111 559 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 METTL27Q8N6F8 245 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF649Q9BS31 505 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ANKRD63C9JTQ0 380 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 IRF6O14896 467 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ACSL1P33121 698 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 CLEC6AQ6EIG7 209 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 USP30Q70CQ3 517 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 THAP3Q8WTV1 239 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 MAP3K14Q99558 947 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 RSL24D1Q9UHA3 163 aaKnown RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 DKKL1Q9UK85 242 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 APC2O95996 2303 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF35P13682 527 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 NCBP2P52298 156 aaKnown RBP eCLIP17■□□□□ 0.312e-8■□□□□ 9.8
COL27A1-201ENST00000356083 RTKNQ9BST9 563 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF69Q9UC07 566 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 ZMYM2Q9UBW7 1377 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ESPL1Q14674 2120 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 YDJCA8MPS7 323 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 PAX7P23759 505 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 FOLH1Q04609 750 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ELP6Q0PNE2 266 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 SAT2Q96F10 170 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 FN3KQ9H479 309 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 EHD1Q9H4M9 534 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 POLR2JP52435 117 aaKnown RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF844Q08AG5 666 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ZCCHC9Q8N567 271 aaKnown RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 DMRTB1Q96MA1 342 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 KCNK4Q9NYG8 393 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 FGF19O95750 216 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 HCAR3P49019 387 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 TNFAIP8L2Q6P589 184 aaPredicted RBP17■□□□□ 0.31
COL27A1-201ENST00000356083 KCNIP3Q9Y2W7 256 aa17■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF536O15090 1300 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 TNFRSF10BO14763 440 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 PEX10O60683 326 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF3P17036 446 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 NPR2P20594 1047 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 C3orf33Q6P1S2 294 aa16.99■□□□□ 0.31
COL27A1-201ENST00000356083 BAP1Q92560 729 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms