RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 MYBL2P10244 700 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 CD9P21926 228 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 ATP5DP30049 168 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 CCL7P80098 99 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 GPLD1P80108 840 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 INSM1Q01101 510 aaPredicted RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 GPR18Q14330 331 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 GBX1Q14549 363 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 UGT3A1Q6NUS8 523 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 WDR93Q6P2C0 686 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 TRMT10CQ7L0Y3 403 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 RAB44Q7Z6P3 723 aaPredicted RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 ZNF761Q86XN6 746 aaPredicted RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 GFM1Q96RP9 751 aaKnown RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 CYTH2Q99418 400 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 MCMBPQ9BTE3 642 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 EPB41L1Q9H4G0 881 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 ACSS3Q9H6R3 686 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 KIR3DX1Q9H7L2 352 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 VWA7Q9Y334 891 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 A0A1W2PQM1 296 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 H2AFXP16104 143 aaPredicted RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 GP5P40197 560 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 CDKN2DP55273 166 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC13-202ENST00000350697 SPIDRQ14159 915 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 AMZ1Q400G9 498 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 HECTD2Q5U5R9 776 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 TMPRSS12Q86WS5 348 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 CHCHD4Q8N4Q1 142 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 OR10G6Q8NH81 332 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 GIMAP7Q8NHV1 300 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 CD200R1Q8TD46 325 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 ATXN7L3BQ96GX2 97 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 AHCYL2Q96HN2 611 aaKnown RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 VPS39Q96JC1 886 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 FERD3LQ96RJ6 166 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 SLC30A3Q99726 388 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 TBC1D10AQ9BXI6 508 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 TRIT1Q9H3H1 467 aaKnown RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 SYNDIG1Q9H7V2 258 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 SLC24A2Q9UI40 661 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 TRMT6Q9UJA5 497 aaKnown RBP13.59□□□□□ -0.23
SEC13-202ENST00000350697 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 ASF1AQ9Y294 204 aa13.59□□□□□ -0.23
SEC13-202ENST00000350697 FAM95CA0A1B0GW59 222 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 EIF3FO00303 357 aaPredicted RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 DUX1O43812 170 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CPNE6O95741 557 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 RPN2P04844 631 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CBSLP0DN79 551 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 ENO3P13929 434 aaPredicted RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 FDXRP22570 491 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CD1CP29017 333 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CBSP35520 551 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 PMS2P54278 862 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 ABRQ12979 859 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 NAA30Q147X3 362 aaPredicted RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 PLCL1Q15111 1095 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 UBAP2Q5T6F2 1119 aaKnown RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 GRTP1Q5TC63 336 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 HES3Q5TGS1 186 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CDCP2Q5VXM1 449 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 RBM44Q6ZP01 1051 aaKnown RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 NEK10Q6ZWH5 1172 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 TBC1D21Q8IYX1 336 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 CACTIN-AS1Q8N1I8 211 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 PHC3Q8NDX5 983 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 SKA2Q8WVK7 121 aaPredicted RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
SEC13-202ENST00000350697 ELMO2Q96JJ3 720 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 RBBP8Q99708 897 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 TXLNGYQ9BZA5 131 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 POLG2Q9UHN1 485 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 SPEGQ15772 3267 aa13.58□□□□□ -0.24
SEC13-202ENST00000350697 PTPRBP23467 1997 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 A0A087WUV0 522 aaPredicted RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 D6RAR5 112 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms