RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GATAD2AQ86YP4 633 aa17.52■□□□□ 0.4
APP-202ENST00000348990 SPATA2LQ8IUW3 424 aaPredicted RBP17.52■□□□□ 0.4
APP-202ENST00000348990 VMP1Q96GC9 406 aa17.52■□□□□ 0.4
APP-202ENST00000348990 RDH12Q96NR8 316 aa17.52■□□□□ 0.4
APP-202ENST00000348990 OR52E6Q96RD3 313 aa17.52■□□□□ 0.4
APP-202ENST00000348990 ABI2Q9NYB9 513 aaPredicted RBP17.52■□□□□ 0.4
APP-202ENST00000348990 EIF3LQ9Y262 564 aaKnown RBP17.52■□□□□ 0.4
APP-202ENST00000348990 DOCK1Q14185 1865 aa17.52■□□□□ 0.4
APP-202ENST00000348990 GPR182O15218 404 aa17.52■□□□□ 0.39
APP-202ENST00000348990 HSMCR30P0CW71 290 aa17.52■□□□□ 0.39
APP-202ENST00000348990 MLLT6P55198 1093 aaPredicted RBP17.52■□□□□ 0.39
APP-202ENST00000348990 CDC42EP1Q00587 391 aa17.52■□□□□ 0.39
APP-202ENST00000348990 PON2Q15165 354 aa17.52■□□□□ 0.39
APP-202ENST00000348990 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.39
APP-202ENST00000348990 P3H2Q8IVL5 708 aa17.52■□□□□ 0.39
APP-202ENST00000348990 NECTIN3Q9NQS3 549 aa17.52■□□□□ 0.39
APP-202ENST00000348990 PCDHGA10Q9Y5H3 936 aa17.52■□□□□ 0.39
APP-202ENST00000348990 PMF1-BGLAPU3KQ54 211 aa17.52■□□□□ 0.39
APP-202ENST00000348990 A0A0U1RQS6 177 aa17.51■□□□□ 0.39
APP-202ENST00000348990 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
APP-202ENST00000348990 FAM47E-STBD1D6RA91 191 aa17.51■□□□□ 0.39
APP-202ENST00000348990 RAMP2O60895 175 aa17.51■□□□□ 0.39
APP-202ENST00000348990 RFPL2O75678 378 aa17.51■□□□□ 0.39
APP-202ENST00000348990 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
APP-202ENST00000348990 OR1E1P30953 314 aa17.51■□□□□ 0.39
APP-202ENST00000348990 GRIK2Q13002 908 aa17.51■□□□□ 0.39
APP-202ENST00000348990 LAIR2Q6ISS4 152 aa17.51■□□□□ 0.39
APP-202ENST00000348990 GLT6D1Q7Z4J2 308 aa17.51■□□□□ 0.39
APP-202ENST00000348990 B3GNT8Q7Z7M8 397 aa17.51■□□□□ 0.39
APP-202ENST00000348990 GALNT10Q86SR1 603 aa17.51■□□□□ 0.39
APP-202ENST00000348990 KRTCAP2Q8N6L1 136 aa17.51■□□□□ 0.39
APP-202ENST00000348990 DERL2Q9GZP9 239 aa17.51■□□□□ 0.39
APP-202ENST00000348990 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
APP-202ENST00000348990 CAB39Q9Y376 341 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 NOX1Q9Y5S8 564 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ACTL7AQ9Y615 435 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CREG1O75629 220 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CCDC159P0C7I6 412 aa17.51■□□□□ 0.39
APP-202ENST00000348990 HOXB8P17481 243 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 PCMT1P22061 227 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CYP4F2P78329 520 aa17.51■□□□□ 0.39
APP-202ENST00000348990 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ZDHHC21Q8IVQ6 265 aa17.51■□□□□ 0.39
APP-202ENST00000348990 NKAPQ8N5F7 415 aaKnown RBP17.51■□□□□ 0.39
APP-202ENST00000348990 RHOXF1Q8NHV9 184 aa17.51■□□□□ 0.39
APP-202ENST00000348990 GPR152Q8TDT2 470 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ROGDIQ9GZN7 287 aa17.51■□□□□ 0.39
APP-202ENST00000348990 POLR1EQ9GZS1 481 aaKnown RBP17.51■□□□□ 0.39
APP-202ENST00000348990 NMUR1Q9HB89 426 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ZBTB20Q9HC78 741 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 PARP14Q460N5 1801 aa17.51■□□□□ 0.39
APP-202ENST00000348990 TBX18O95935 607 aa17.51■□□□□ 0.39
APP-202ENST00000348990 SERPINF2P08697 491 aa17.51■□□□□ 0.39
APP-202ENST00000348990 ACVRL1P37023 503 aa17.51■□□□□ 0.39
APP-202ENST00000348990 NEK2P51955 445 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CBX2Q14781 532 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 ABRAXAS2Q15018 415 aa17.51■□□□□ 0.39
APP-202ENST00000348990 PIK3R6Q5UE93 754 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CES5AQ6NT32 575 aa17.51■□□□□ 0.39
APP-202ENST00000348990 SVOPQ8N4V2 548 aa17.51■□□□□ 0.39
APP-202ENST00000348990 AADATQ8N5Z0 425 aa17.51■□□□□ 0.39
APP-202ENST00000348990 FAM83FQ8NEG4 500 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 OR4F6Q8NGB9 312 aa17.51■□□□□ 0.39
APP-202ENST00000348990 CDC26Q8NHZ8 85 aa17.51■□□□□ 0.39
APP-202ENST00000348990 EFHD2Q96C19 240 aaPredicted RBP17.51■□□□□ 0.39
APP-202ENST00000348990 CTRCQ99895 268 aa17.51■□□□□ 0.39
APP-202ENST00000348990 MIOSQ9NXC5 875 aa17.51■□□□□ 0.39
APP-202ENST00000348990 AIREO43918 545 aa17.5■□□□□ 0.39
APP-202ENST00000348990 MMP2P08253 660 aa17.5■□□□□ 0.39
APP-202ENST00000348990 HORMAD1Q86X24 394 aa17.5■□□□□ 0.39
APP-202ENST00000348990 HIPK1Q86Z02 1210 aa17.5■□□□□ 0.39
APP-202ENST00000348990 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
APP-202ENST00000348990 ULK4Q96C45 1275 aa17.5■□□□□ 0.39
APP-202ENST00000348990 BARD1Q99728 777 aaKnown RBP17.5■□□□□ 0.39
APP-202ENST00000348990 APOL4Q9BPW4 351 aa17.5■□□□□ 0.39
APP-202ENST00000348990 TRIM62Q9BVG3 475 aa17.5■□□□□ 0.39
APP-202ENST00000348990 IL37Q9NZH6 218 aa17.5■□□□□ 0.39
APP-202ENST00000348990 NEU3Q9UQ49 428 aa17.5■□□□□ 0.39
APP-202ENST00000348990 A0A0G2JLL6 359 aaPredicted RBP17.5■□□□□ 0.39
APP-202ENST00000348990 IDH3BO43837 385 aa17.5■□□□□ 0.39
APP-202ENST00000348990 APOA1P02647 267 aa17.5■□□□□ 0.39
APP-202ENST00000348990 TBX4P57082 545 aa17.5■□□□□ 0.39
APP-202ENST00000348990 XKR7Q5GH72 579 aa17.5■□□□□ 0.39
APP-202ENST00000348990 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
APP-202ENST00000348990 PRRT2Q7Z6L0 340 aaPredicted RBP17.5■□□□□ 0.39
APP-202ENST00000348990 BRSK1Q8TDC3 778 aa17.5■□□□□ 0.39
APP-202ENST00000348990 IPPKQ9H8X2 491 aa17.5■□□□□ 0.39
APP-202ENST00000348990 NEK6Q9HC98 313 aa17.5■□□□□ 0.39
APP-202ENST00000348990 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
APP-202ENST00000348990 SCN4AP35499 1836 aa17.5■□□□□ 0.39
APP-202ENST00000348990 TAF4O00268 1085 aa17.49■□□□□ 0.39
APP-202ENST00000348990 NPPAP01160 153 aa17.49■□□□□ 0.39
APP-202ENST00000348990 ATXN1LP0C7T5 689 aaKnown RBP17.49■□□□□ 0.39
APP-202ENST00000348990 ODC1P11926 461 aa17.49■□□□□ 0.39
APP-202ENST00000348990 GDF5P43026 501 aa17.49■□□□□ 0.39
APP-202ENST00000348990 HSPA7P48741 367 aa17.49■□□□□ 0.39
APP-202ENST00000348990 UBE2UQ5VVX9 321 aa17.49■□□□□ 0.39
APP-202ENST00000348990 STEAP3Q658P3 488 aa17.49■□□□□ 0.39
APP-202ENST00000348990 DESI1Q6ICB0 168 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms