RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OPTCQ9UBM4 332 aa18.27■□□□□ 0.52
PTN-201ENST00000348225 TMEM98Q9Y2Y6 226 aa18.27■□□□□ 0.52
PTN-201ENST00000348225 MGAT4DA6NG13 374 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 LRRC72A6NJI9 287 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ANKRD65E5RJM6 399 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 CHUKO15111 745 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 TAPBPO15533 448 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 HNRNPCL1O60812 293 aaKnown RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 PSIP1O75475 530 aaKnown RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 POP7O75817 140 aaKnown RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 ESRRBO95718 433 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 MYCLP1P12525 358 aaPredicted RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 EPHA3P29320 983 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 TPMTP51580 245 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 INHBCP55103 352 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 BTKQ06187 659 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 HABP4Q5JVS0 413 aaKnown RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 KANK2Q63ZY3 851 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 Q6ZS52 159 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 GPRIN3Q6ZVF9 776 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 RASGRP3Q8IV61 690 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ZNF547Q8IVP9 402 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ADHFE1Q8IWW8 467 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 OR2T34Q8NGX1 318 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 HMGB4Q8WW32 186 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ESAMQ96AP7 390 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 MAELQ96JY0 434 aaKnown RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 OR52B2Q96RD2 323 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 WDR55Q9H6Y2 383 aaPredicted RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 MEAF6Q9HAF1 191 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 SGK2Q9HBY8 427 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ZBTB26Q9HCK0 441 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 ANGPTL3Q9Y5C1 460 aa18.27■□□□□ 0.51
PTN-201ENST00000348225 DNMT3AQ9Y6K1 912 aaPredicted RBP18.27■□□□□ 0.51
PTN-201ENST00000348225 GOLGA8QA0A0J9YX86 632 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 GOLGA8OA6NCC3 632 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 KLHL33A6NCF5 533 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 GOLGA8NF8WBI6 632 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 K7EPI3 171 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 CCNT2O60583 730 aaKnown RBP18.26■□□□□ 0.51
PTN-201ENST00000348225 UNC5CO95185 931 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 MAT2AP31153 395 aaKnown RBP18.26■□□□□ 0.51
PTN-201ENST00000348225 CORO7P57737 925 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 ARHGAP8P85298 464 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 TFF2Q03403 129 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 ABRQ12979 859 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 CDC16Q13042 620 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 CLEC6AQ6EIG7 209 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 SYT13Q7L8C5 426 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 GOLGA7Q7Z5G4 137 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 TRIM69Q86WT6 500 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 PGBD3Q8N328 593 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 DENND6BQ8NEG7 585 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 FOXJ1Q92949 421 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 SHDQ96IW2 340 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 PPP1R36Q96LQ0 422 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 LGR4Q9BXB1 951 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 NUSAP1Q9BXS6 441 aaKnown RBP18.26■□□□□ 0.51
PTN-201ENST00000348225 DPEP2Q9H4A9 486 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 LMAN1LQ9HAT1 526 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 ARMCX1Q9P291 453 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 ASB1Q9Y576 335 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 OR1A2Q9Y585 309 aa18.26■□□□□ 0.51
PTN-201ENST00000348225 E9PBE3 544 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 PPP6CO00743 305 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 SDHDO14521 159 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 KLHL41O60662 606 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 STK16O75716 305 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 CHEK2O96017 543 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 OTCP00480 354 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 JUNP05412 331 aaKnown RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 NCF2P19878 526 aaPredicted RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 IGFALSP35858 605 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 GGT5P36269 586 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 RASSF2P50749 326 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 PPP2CBP62714 309 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 PPP2CAP67775 309 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 ACTN3Q08043 901 aaPredicted RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 C18orf21Q32NC0 220 aaPredicted RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 LSM12Q3MHD2 195 aaKnown RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 NXNQ6DKJ4 435 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 LRRC70Q7Z2Q7 622 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 AMZ2Q86W34 360 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 HOMEZQ8IX15 550 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 OXR1Q8N573 874 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 LILRA3Q8N6C8 439 aaPredicted RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 TEX9Q8N6V9 391 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 FLCNQ8NFG4 579 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 CFAP61Q8NHU2 1237 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 ACTRT2Q8TDY3 377 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 ATP6V1E2Q96A05 226 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 C19orf60Q96EN9 201 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 PRR11Q96HE9 360 aaPredicted RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 NOL11Q9H8H0 719 aaKnown RBP18.25■□□□□ 0.51
PTN-201ENST00000348225 PFDN4Q9NQP4 134 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 ITM2CQ9NQX7 267 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 GULP1Q9UBP9 304 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 WNT16Q9UBV4 365 aa18.25■□□□□ 0.51
PTN-201ENST00000348225 FBXL21Q9UKT6 434 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms