RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 YIPF6Q96EC8 236 aa9.95□□□□□ -0.82
TRAPPC6B-202ENST00000347691 FUBP3Q96I24 572 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAPPC6B-202ENST00000347691 TRIB3Q96RU7 358 aa9.95□□□□□ -0.82
TRAPPC6B-202ENST00000347691 Q9Y3F1 56 aa9.95□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MAGED1Q9Y5V3 778 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RAD51BO15315 384 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 TSPAN12O95859 305 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 GSNP06396 782 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 IGFBP5P24593 272 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PTGER3P43115 390 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 BRCC3P46736 316 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PPP5CP53041 499 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 GTF2H2Q13888 395 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 NFE2Q16621 373 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PLEKHG6Q3KR16 790 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RUNDC3AQ59EK9 446 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 C1QTNF12Q5T7M4 302 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 GTF2H2CQ6P1K8 395 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 LETMD1Q6P1Q0 360 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MOB2Q70IA6 237 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CCDC80Q76M96 950 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RBM23Q86U06 439 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CADM3Q8N126 398 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ELMOD1Q8N336 334 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 GTF2H4Q92759 462 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 LPPQ93052 612 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RMDN1Q96DB5 314 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SLC10A4Q96EP9 437 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 C8orf48Q96LL4 319 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DACH2Q96NX9 599 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MGME1Q9BQP7 344 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CORO1BQ9BR76 489 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 KLHL25Q9H0H3 589 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DUSP21Q9H596 190 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 VAPAQ9P0L0 249 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 IKZF3Q9UKT9 509 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DFNA5O60443 496 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ZNF623O75123 536 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 XYLBO75191 536 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CREG1O75629 220 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SEC24AO95486 1093 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SLC2A4P14672 509 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 AGXTP21549 392 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 KPNA1P52294 538 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DGKQP52824 942 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 FADDQ13158 208 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PTPRCAPQ14761 206 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 KIAA0040Q15053 153 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PAGE2BQ5JRK9 111 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 METTL2BQ6P1Q9 378 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MILR1Q7Z6M3 343 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PLD3Q8IV08 490 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CD200R1Q8TD46 325 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 FCGR1BQ92637 280 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 HPS1Q92902 700 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 FAM120BQ96EK7 910 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CINPQ9BW66 212 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ACTL8Q9H568 366 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PAK1IP1Q9NWT1 392 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 NUDT5Q9UKK9 219 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PCDHB8Q9UN66 801 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SAMD4AQ9UPU9 718 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PCDHB1Q9Y5F3 818 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ST14Q9Y5Y6 855 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 TAF4O00268 1085 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RGS10O43665 173 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ARHGEF15O94989 841 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ZBTB7AO95365 584 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PON2Q15165 354 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 NPTX1Q15818 432 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DEPDC1Q5TB30 811 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RAP1GAP2Q684P5 730 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PIWIL3Q7Z3Z3 882 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 GOLGA7Q7Z5G4 137 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ARMC8Q8IUR7 673 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 TMEM132CQ8N3T6 1108 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SIDT2Q8NBJ9 832 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 EEF1AKMT1Q8WVE0 214 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 STARD8Q92502 1023 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PYURFQ96I23 114 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MAGEH1Q9H213 219 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 KAT8Q9H7Z6 458 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 MOV10Q9HCE1 1003 aaKnown RBP9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ATP11BQ9Y2G3 1177 aa9.94□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CLDN24A6NM45 220 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 HK3P52790 923 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SLC35A2P78381 396 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 RING1Q06587 406 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 EFEMP1Q12805 493 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 ZNF181Q2M3W8 571 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 FBXO48Q5FWF7 155 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 OR4F6Q8NGB9 312 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 OR52B6Q8NGF0 335 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 PPP1R13LQ8WUF5 828 aa9.93□□□□□ -0.82
TRAPPC6B-202ENST00000347691 SGCDQ92629 289 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms