RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 J3QRK9 145 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 C7P10643 843 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 IL12RB1P42701 662 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SCAPQ12770 1279 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 TUBA3CQ13748 450 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 ATP6AP1Q15904 470 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 TCAIMQ8N3R3 496 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 FBXL8Q96CD0 374 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 COPS8Q99627 209 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 DERL2Q9GZP9 239 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 OGDHLQ9ULD0 1010 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 GLYATL1P3A0A0U1RQE8 302 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 TP73O15350 636 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 CCL16O15467 120 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 APODP05090 189 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SEPHS1P49903 392 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SULT1C3Q6IMI6 304 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 OR4A15Q8NGL6 344 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 FNDC8Q8TC99 324 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 ZNF778Q96MU6 729 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 KCTD5Q9NXV2 234 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 ERGIC3Q9Y282 383 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 KCTD3Q9Y597 815 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 RSL1D1O76021 490 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 PHACTR4Q8IZ21 702 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 DNAJB8Q8NHS0 232 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 CDKN2AIPNLQ96HQ2 116 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 WDR83Q9BRX9 315 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 KAT8Q9H7Z6 458 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 PRR23D1E9PI22 279 aaPredicted RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 PRAMEF1O95521 474 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 PRR23D2P0DMB1 279 aaPredicted RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 ACRP10323 421 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 MAGEA11P43364 429 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 ITGA1P56199 1179 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 MYBPC1Q00872 1141 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 TRMT11Q7Z4G4 463 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 GPR156Q8NFN8 814 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 PHF24Q9UPV7 400 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 TNRC6CQ9HCJ0 1690 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 AIREO43918 545 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 ABCB7O75027 752 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 CLPXO76031 633 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 NPPAP01160 153 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 TALDO1P37837 337 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 SLC16A1P53985 500 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 ANKRD46Q86W74 232 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 NPWQ8N729 165 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 OR6K2Q8NGY2 324 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 KIAA1191Q96A73 305 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 MAGEE1Q9HCI5 957 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 C1orf109Q9NX04 203 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 CDV3Q9UKY7 258 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 hCG_2039718K7EN88 272 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 CYP11A1P05108 521 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 FMO3P31513 532 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 STT3AP46977 705 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 NIPAL1Q6NVV3 410 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 CCDC80Q76M96 950 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 KBTBD7Q8WVZ9 684 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 PHF21AQ96BD5 680 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 TIFAQ96CG3 184 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 AURKBQ96GD4 344 aaPredicted RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 POPDC3Q9HBV1 291 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 EBF1Q9UH73 591 aa14.5□□□□□ -0.09
NUP50-201ENST00000347635 WBP11Q9Y2W2 641 aaKnown RBP14.5□□□□□ -0.09
NUP50-201ENST00000347635 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 C9IYK1 514 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 CDC7O00311 574 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 SGTAO43765 313 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 NIPSNAP2O75323 286 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 TRBC1P01850 177 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 NDUFA5Q16718 116 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 ZNF534Q76KX8 674 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 OLIG1Q8TAK6 271 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 FAR1Q8WVX9 515 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 MRGPRX2Q96LB1 330 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 GALPQ9UBC7 116 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 PRORSD1PA6NEY8 169 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 CCDC182A6NF36 153 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 LOC110117498-PIK3R3F6TDL0 507 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 H0YAE9 185 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 PRKCGP05129 697 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 GPM6BQ13491 265 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 CPTPQ5TA50 214 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 TRNP1Q6NT89 227 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 PRSS55Q6UWB4 352 aaPredicted RBP14.49□□□□□ -0.09
NUP50-201ENST00000347635 SERPINA9Q86WD7 417 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 ANKLE1Q8NAG6 615 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 TSPEARQ8WU66 669 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 HDHD2Q9H0R4 259 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 BRD9Q9H8M2 597 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 SMOXQ9NWM0 555 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 TSC22D2O75157 780 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 C1RP00736 705 aa14.49□□□□□ -0.09
NUP50-201ENST00000347635 VARSP26640 1264 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms