RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MAPK10P53779 464 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 ZRANB3Q5FWF4 1079 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 SNAP47Q5SQN1 464 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 METRNLQ641Q3 311 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 PCSK4Q6UW60 755 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 ARHGAP22Q7Z5H3 698 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 SLC9B2Q86UD5 537 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 AMZ2Q86W34 360 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 ZFAND4Q86XD8 727 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 AGGF1Q8N302 714 aaeCLIP15.72■□□□□ 0.11
RAB5C-201ENST00000346213 RIBC1Q8N443 379 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-201ENST00000346213 LKAAEAR1Q8TD35 194 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 NCSTNQ92542 709 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 WWP1Q9H0M0 922 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 PPCSQ9HAB8 311 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 APMAPQ9HDC9 416 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 MARCH4Q9P2E8 410 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-201ENST00000346213 KLHL3Q9UH77 587 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 LGALS13Q9UHV8 139 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 CRLS1Q9UJA2 301 aa15.72■□□□□ 0.11
RAB5C-201ENST00000346213 KALRNO60229 2985 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 MN1Q10571 1320 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-201ENST00000346213 OR1I1O60431 355 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 CDH16O75309 829 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 F7P08709 466 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-201ENST00000346213 ARNTP27540 789 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 PDHA2P29803 388 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 ATP5DP30049 168 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 HPDP32754 393 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-201ENST00000346213 PHBP35232 272 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 ABCG1P45844 678 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 SLCO1A2P46721 670 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 GPX6P59796 221 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 GPLD1P80108 840 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 ACVR1Q04771 509 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 CDH17Q12864 832 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 GTF2H3Q13889 308 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 BBS9Q3SYG4 887 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 TMEM71Q6P5X7 295 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 LDB1Q86U70 411 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-201ENST00000346213 ANKMY2Q8IV38 441 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 OR2L2Q8NH16 312 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 STYXQ8WUJ0 223 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 LINC00615Q96LM1 132 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-201ENST00000346213 PPP1R2P1Q96PQ5 205 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 THSD1Q9NS62 852 aa15.71■□□□□ 0.11
RAB5C-201ENST00000346213 BANF1O75531 89 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 ITGALP20701 1170 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 IDSP22304 550 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 RBMS1P29558 406 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CDK16Q00536 496 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 BIRC2Q13490 618 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 HP1BP3Q5SSJ5 553 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 TSTD2Q5T7W7 516 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 TDRPQ86YL5 185 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 ZNF248Q8NDW4 579 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 FBXO36Q8NEA4 188 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 HDAC10Q969S8 669 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 PPM1MQ96MI6 270 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 WDR83Q9BRX9 315 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 STRADBQ9C0K7 418 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CNOT10Q9H9A5 744 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 VPS37BQ9H9H4 285 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CHRAC1Q9NRG0 131 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 SIDT1Q9NXL6 827 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 ZDHHC3Q9NYG2 299 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 EURLQ9NYK6 297 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 FETUBQ9UGM5 382 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 TCAF1Q9Y4C2 921 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 PCDHGA7Q9Y5G6 932 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 TEX264Q9Y6I9 313 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 FAM208BQ5VWN6 2430 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 MGAT4DA6NG13 374 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 KLK10O43240 276 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 DUX1O43812 170 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 AVILO75366 819 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 GOT2P00505 430 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 C9P02748 559 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 POLBP06746 335 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 JMJD7P0C870 316 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 ATP1B2P14415 290 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 MDH1P40925 334 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 PREPP48147 710 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 EPHA4P54764 986 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 GNGT1P63211 74 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 RASA2Q15283 850 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 WDR74Q6RFH5 385 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CERS6Q6ZMG9 384 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 LSMEM2Q8N112 164 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 KCNE4Q8WWG9 221 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 LRRC39Q96DD0 335 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 RANBP9Q96S59 729 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 COPS8Q99627 209 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 CTRCQ99895 268 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 C19orf43Q9BQ61 176 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 UCK1Q9HA47 277 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms