RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 GGT5P36269 586 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 MAPK8P45983 427 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 NR1H2P55055 460 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CDH15P55291 814 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 PRMT2P55345 433 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 SGO1Q5FBB7 561 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 GLYATQ6IB77 296 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ECHDC3Q96DC8 303 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 SCRN2Q96FV2 425 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ADI1Q9BV57 179 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 SLC46A2Q9BY10 475 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ZFP14Q9HCL3 533 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 TMPRSS11EQ9UL52 423 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 RNF103-CHMP3A0A140T963 221 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 H3BSA7 217 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 K7EPI3 171 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 DFNA5O60443 496 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 RASAL1O95294 804 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 LAG3P18627 525 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CCR7P32248 378 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 MERTKQ12866 999 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 SLC44A4Q53GD3 710 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 LYPLAL1Q5VWZ2 237 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 TPRG1Q6ZUI0 275 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 RGL4Q8IZJ4 473 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 MYLIPQ8WY64 445 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 PPP3R2Q96LZ3 170 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 C9orf16Q9BUW7 83 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 IKZF5Q9H5V7 419 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ZNHIT2Q9UHR6 403 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 MYRFQ9Y2G1 1151 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ANGPTL3Q9Y5C1 460 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CHD7Q9P2D1 2997 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 DYTNA2CJ06 578 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 GRXCR2A6NFK2 248 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 VEGFBP49765 207 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 PWP1Q13610 501 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 ARHGEF7Q14155 803 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
UPF3B-202ENST00000345865 TBPL2Q6SJ96 375 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 SUSD1Q6UWL2 747 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 KRTCAP2Q8N6L1 136 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 UBTD2Q8WUN7 234 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 MTFMTQ96DP5 389 aaKnown RBP15.13■□□□□ 0.01
UPF3B-202ENST00000345865 RMND5BQ96G75 393 aaPredicted RBP15.13■□□□□ 0.01
UPF3B-202ENST00000345865 ZNF583Q96ND8 569 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 TOX2Q96NM4 488 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 NTMT1Q9BV86 223 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 SUV39H2Q9H5I1 410 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 ZNF490Q9ULM2 529 aaPredicted RBP15.13■□□□□ 0.01
UPF3B-202ENST00000345865 PCDHB3Q9Y5E6 796 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 CEPT1Q9Y6K0 416 aa15.13■□□□□ 0.01
UPF3B-202ENST00000345865 KRT87PA6NCN2 255 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 CCDC160A6NGH7 325 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 ULK1O75385 1050 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 UMPSP11172 480 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 CCL5P13501 91 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 ZNF23P17027 643 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 MSH3P20585 1137 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 CCR2P41597 374 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 NSG1P42857 185 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 SLC36A3Q495N2 470 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 TRIM46Q7Z4K8 759 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 RIMKLAQ8IXN7 391 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 GTF2H4Q92759 462 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 FBXL20Q96IG2 436 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 RNF145Q96MT1 663 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 CHID1Q9BWS9 393 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 SOX17Q9H6I2 414 aaPredicted RBP15.12■□□□□ 0.01
UPF3B-202ENST00000345865 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 SLCO3A1Q9UIG8 710 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 ATP11BQ9Y2G3 1177 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 MANBAO00462 879 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 RGS14O43566 566 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 MYF6P23409 242 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 SNRPD1P62314 119 aaKnown RBP15.12■□□□□ 0.01
UPF3B-202ENST00000345865 FAM174BQ3ZCQ3 159 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 AASDHQ4L235 1098 aaPredicted RBP15.12■□□□□ 0.01
UPF3B-202ENST00000345865 SPANXN4Q5MJ08 99 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 TMTC4Q5T4D3 741 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 C22orf39Q6P5X5 142 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 DPY19L3Q6ZPD9 716 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 PROSER1Q86XN7 944 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 MSRB3Q8IXL7 192 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 TBC1D21Q8IYX1 336 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 LIX1Q8N485 282 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 BPIFB1Q8TDL5 484 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 MPP4Q96JB8 637 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 CARS2Q9HA77 564 aaKnown RBP15.12■□□□□ 0.01
UPF3B-202ENST00000345865 NTN4Q9HB63 628 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 ZDHHC3Q9NYG2 299 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 DMTF1Q9Y222 760 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 PDE10AQ9Y233 779 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 HS3ST2Q9Y278 367 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 PPIL1Q9Y3C6 166 aa15.12■□□□□ 0.01
UPF3B-202ENST00000345865 AREL1O15033 823 aa15.11■□□□□ 0.01
UPF3B-202ENST00000345865 STK16O75716 305 aa15.11■□□□□ 0.01
UPF3B-202ENST00000345865 C1SP09871 688 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms