RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 BDNFP23560 247 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 POF1BQ8WVV4 589 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 ZFP3Q96NJ6 502 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 MCMBPQ9BTE3 642 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 NAV1Q8NEY1 1877 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 TGFB2P61812 414 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 CD83Q01151 205 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 C9orf64Q5T6V5 341 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 DNM1P34Q6PK57 102 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 COPS7AQ9UBW8 275 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 XKP51811 444 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 E2F1Q01094 437 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.65
HDAC4-201ENST00000345617 OR14K1Q8NGZ2 314 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 TAS2R14Q9NYV8 317 aa19.08■□□□□ 0.65
HDAC4-201ENST00000345617 DAPL1A0PJW8 107 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 SLC25A14O95258 325 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 ADH1CP00326 375 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 STXBP1P61764 594 aaKnown RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 RNASEH2BQ5TBB1 312 aaKnown RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 FIP1L1Q6UN15 594 aaKnown RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 UBE2R2Q712K3 238 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 KCNU1A8MYU2 1149 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 MAGP20916 626 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 TEX44Q53QW1 395 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 KIF18BQ86Y91 864 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 BIRC8Q96P09 236 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 LGMNQ99538 433 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 KCNMB3Q9NPA1 279 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 MED31Q9Y3C7 131 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 AMD1P17707 334 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 HERVK_113P63132 956 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 NPNTQ6UXI9 565 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 NUP54Q7Z3B4 507 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 SMG8Q8ND04 991 aaKnown RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 NDC1Q9BTX1 674 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 ERVK-6Q9BXR3 956 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 DCLK1O15075 740 aa19.08■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF431Q8TF32 576 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.64
HDAC4-201ENST00000345617 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 DNM1LO00429 736 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ANXA3P12429 323 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 FAM174BQ3ZCQ3 159 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 NCCRP1Q6ZVX7 275 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 CRYBG2Q8N1P7 616 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ANKFN1Q8N957 763 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 BTN2A3PQ96KV6 586 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 CADM1Q9BY67 442 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 AGO3Q9H9G7 860 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 PCDH18Q9HCL0 1135 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 DLGAP1O14490 977 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ERAL1O75616 437 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ARL13AQ5H913 290 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 SH3D19Q5HYK7 790 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 HECTD2Q5U5R9 776 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ZBTB46Q86UZ6 589 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 OTUB2Q96DC9 234 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 FAXDC2Q96IV6 333 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 PTPRJQ12913 1337 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ARL6IP5O75915 188 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 SLC43A3Q8NBI5 491 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 SPATC1LQ9H0A9 340 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 TMEM184CQ9NVA4 438 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 MAP4K5Q9Y4K4 846 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 NFAT5O94916 1531 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 TSPAN3O60637 253 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 CDH12P55289 794 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 NOL9Q5SY16 702 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 AADACL4Q5VUY2 407 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF527Q8NB42 609 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 OR2L8Q8NGY9 312 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 C1orf109Q9NX04 203 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 COL6A1P12109 1028 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 RGS19P49795 217 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 SMSP52788 366 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 EGFL6Q8IUX8 553 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 LPGAT1Q92604 370 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 RENP00797 406 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 UBA1P22314 1058 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 AQP1P29972 269 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 OR5J2Q8NH18 312 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 KLHL6Q8WZ60 621 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 HEBP2Q9Y5Z4 205 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 MARCKSL1P49006 195 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 MRPS5P82675 430 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 RBM12BQ8IXT5 1001 aaKnown RBP19.07■□□□□ 0.64
HDAC4-201ENST00000345617 OR52J3Q8NH60 311 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 SLC13A3Q8WWT9 602 aa19.07■□□□□ 0.64
HDAC4-201ENST00000345617 IDH3AP50213 366 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 TDGQ13569 410 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 TBC1D25Q3MII6 688 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MYO19Q96H55 970 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 KCNN3Q9UGI6 736 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 GADD45AP24522 165 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF157P51786 506 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 SEC14L1Q92503 715 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ELMO3Q96BJ8 720 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 LENG8Q96PV6 779 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MIPEPQ99797 713 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms