RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 UBA6A0AVT1 1052 aaPredicted RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR51F1A6NGY5 319 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 PFDN6O15212 129 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 STK17BO94768 372 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 DLGAP3O95886 979 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 PRSS56P0CW18 603 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 KCNJ1P48048 391 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 ARL4DP49703 201 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SEPHS1P49903 392 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SESN2P58004 480 aaPredicted RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 HSD11B2P80365 405 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 BOP1Q14137 746 aaKnown RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 CYP1B1Q16678 543 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SYTL3Q4VX76 610 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 DUS1LQ6P1R4 473 aaKnown RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 ZNF534Q76KX8 674 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 LRRC6Q86X45 466 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 PPP1R3BQ86XI6 285 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 REXO1L1PQ8IX06 675 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 LILRA3Q8N6C8 439 aaPredicted RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SIDT2Q8NBJ9 832 aaKnown RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR8K5Q8NH50 307 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 ACTRT1Q8TDG2 376 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 GRK7Q8WTQ7 553 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 LCN9Q8WX39 176 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 ELMO1Q92556 727 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 TTC9Q92623 222 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 TFGQ92734 400 aaPredicted RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 MAGOHBQ96A72 148 aaKnown RBP12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 FERD3LQ96RJ6 166 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 CTRCQ99895 268 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SRMSQ9H3Y6 488 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 APMAPQ9HDC9 416 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 CHRAC1Q9NRG0 131 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 TREX1Q9NSU2 369 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 CATSPERZQ9NTU4 200 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 SLC2A6Q9UGQ3 507 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 POLG2Q9UHN1 485 aa12.98□□□□□ -0.33
SIRPB3P-201ENST00000340424 PIKFYVEQ9Y2I7 2098 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 IGHV5-51A0A0C4DH38 117 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 KIF1CO43896 1103 aaKnown RBP12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 ZBTB11O95625 1053 aaPredicted RBP12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 KRT14P02533 472 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 MT-ND3P03897 115 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 MLNP12872 115 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 PREPP48147 710 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 FNTAP49354 379 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 TMTC4Q5T4D3 741 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 VASH2Q86V25 355 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 TBC1D21Q8IYX1 336 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 D2HGDHQ8N465 521 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 ASZ1Q8WWH4 475 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 ZNF778Q96MU6 729 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 ULBP3Q9BZM4 244 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 SYTL2Q9HCH5 934 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 RARRES3Q9UL19 164 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 PRSS21Q9Y6M0 314 aa12.97□□□□□ -0.33
SIRPB3P-201ENST00000340424 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MAGEB16A2A368 324 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PRMT5O14744 637 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 CD3EAPO15446 510 aaKnown RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR1I1O60431 355 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 RPN2P04844 631 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PAMP19021 973 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PDHA2P29803 388 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SHMT2P34897 504 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PPP1CAP62136 330 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 TUBB4BP68371 445 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SH3BP2P78314 561 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MC1RQ01726 317 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 GPS1Q13098 491 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 TUBB3Q13509 450 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 TUBB2AQ13885 445 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 KCNJ11Q14654 390 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 TMED2Q15363 201 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 DNAJC21Q5F1R6 531 aaKnown RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MRNIPQ6NTE8 343 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 CCDC137Q6PK04 289 aaKnown RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 RASGRP3Q8IV61 690 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MCUQ8NE86 351 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR4E2Q8NGC2 313 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 STAMBPL1Q96FJ0 436 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SLC45A3Q96JT2 553 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms