RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 CNPY4Q8N129 248 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 FAM181AQ8N9Y4 354 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 KYQ8NBH2 561 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 SLC37A2Q8TED4 501 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 MZB1Q8WU39 189 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 TFGQ92734 400 aaPredicted RBP21.65■■□□□ 1.06
SDC3-202ENST00000339394 LINGO1Q96FE5 620 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 APOLD1Q96LR9 279 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 IMP3Q9NV31 184 aaKnown RBP21.65■■□□□ 1.06
SDC3-202ENST00000339394 RUVBL2Q9Y230 463 aaKnown RBP21.65■■□□□ 1.06
SDC3-202ENST00000339394 SPEGQ15772 3267 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 SH3BP5O60239 455 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 C2P06681 752 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 SLC19A1P41440 591 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 MAGEA12P43365 314 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 INAVAQ3KP66 663 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 PPM1JQ5JR12 505 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 LRIG3Q6UXM1 1119 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 TIFABQ6ZNK6 161 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 NEK10Q6ZWH5 1172 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 PIWIL4Q7Z3Z4 852 aaKnown RBP21.65■■□□□ 1.06
SDC3-202ENST00000339394 RIBC1Q8N443 379 aaPredicted RBP21.65■■□□□ 1.06
SDC3-202ENST00000339394 ARL14Q8N4G2 192 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 RHBDD1Q8TEB9 315 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 ZBTB9Q96C00 473 aa21.65■■□□□ 1.06
SDC3-202ENST00000339394 GVINP1Q7Z2Y8 2422 aa21.64■■□□□ 1.06
SDC3-202ENST00000339394 A0A096LPK6 155 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 RFPL1O75677 317 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 MATN4O95460 622 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 CCDC166P0CW27 439 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 MYF5P13349 255 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 XRCC1P18887 633 aaPredicted RBP21.64■■□□□ 1.05
SDC3-202ENST00000339394 GMPRP36959 345 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 MAZP56270 477 aaKnown RBP21.64■■□□□ 1.05
SDC3-202ENST00000339394 KRT71Q3SY84 523 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 C14orf28Q4W4Y0 310 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 CEP85LQ5SZL2 805 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 NAXDQ8IW45 347 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 SPATA6LQ8N4H0 392 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 NKAPQ8N5F7 415 aaKnown RBP21.64■■□□□ 1.05
SDC3-202ENST00000339394 CFAP61Q8NHU2 1237 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 MAPK15Q8TD08 544 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 PDLIM5Q96HC4 596 aaKnown RBP21.64■■□□□ 1.05
SDC3-202ENST00000339394 UBXN10Q96LJ8 280 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 CPNE7Q9UBL6 633 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 TLK1Q9UKI8 766 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 ASF1AQ9Y294 204 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 ACOT9Q9Y305 439 aa21.64■■□□□ 1.05
SDC3-202ENST00000339394 PRAMEF33A0A0G2JMD5 474 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 FOXO6A8MYZ6 492 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 MTHFD1P11586 935 aaKnown RBP21.63■■□□□ 1.05
SDC3-202ENST00000339394 KRT15P19012 456 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 LIMK1P53667 647 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 LRRC8EQ6NSJ5 796 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 DUS1LQ6P1R4 473 aaKnown RBP21.63■■□□□ 1.05
SDC3-202ENST00000339394 HDXQ7Z353 690 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 SLC9B2Q86UD5 537 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 MYO1HQ8N1T3 1032 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 PHC3Q8NDX5 983 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 CXorf40BQ96DE9 158 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 CAMK1GQ96NX5 476 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.63■■□□□ 1.05
SDC3-202ENST00000339394 LGALS13Q9UHV8 139 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 DMXL1Q9Y485 3027 aa21.63■■□□□ 1.05
SDC3-202ENST00000339394 LY6G6EA0A0G2JKS1 128 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 MPC1LP0DKB6 136 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 FASLGP48023 281 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 UBE2IP63279 158 aaKnown RBP21.62■■□□□ 1.05
SDC3-202ENST00000339394 PROX2Q3B8N5 592 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 ASB11Q8WXH4 323 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 FOPNLQ96NB1 174 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 VPS11Q9H270 941 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 SLC40A1Q9NP59 571 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 HEBP2Q9Y5Z4 205 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 U3KQA8 63 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 FAM186AA6NE01 2351 aa21.62■■□□□ 1.05
SDC3-202ENST00000339394 A0A087X1B8 175 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 A0A1W2PPM1 405 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 VIPP01282 170 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 MT-ND3P03897 115 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 SLC26A3P40879 764 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 HHEXQ03014 270 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 TAF1BQ53T94 588 aaPredicted RBP21.61■■□□□ 1.05
SDC3-202ENST00000339394 UNC5DQ6UXZ4 953 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 CCDC91Q7Z6B0 441 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 TBC1D1Q86TI0 1168 aaPredicted RBP21.61■■□□□ 1.05
SDC3-202ENST00000339394 TRIM48Q8IWZ4 208 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 OR5AR1Q8NGP9 310 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 FERD3LQ96RJ6 166 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 UNKQ9C0B0 810 aaKnown RBP21.61■■□□□ 1.05
SDC3-202ENST00000339394 POT1Q9NUX5 634 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 NCKIPSDQ9NZQ3 722 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 PADI4Q9UM07 663 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 COLEC10Q9Y6Z7 277 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 CFAP54Q96N23 3096 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 PPM1DO15297 605 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 CBFA2T3O75081 653 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 MPOP05164 745 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 RPIAP49247 311 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 IRF9Q00978 393 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms