RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC16A12Q6ZSM3 486 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ANKS3Q6ZW76 656 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SLFN12Q8IYM2 578 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 RDH10Q8IZV5 341 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SVBPQ8N300 66 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 DENND6BQ8NEG7 585 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 AGBL3Q8NEM8 1001 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TSPEARQ8WU66 669 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 RIT1Q92963 219 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 LENG8Q96PV6 779 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 INPP5KQ9BT40 448 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NFKBIL1Q9UBC1 381 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NUFIP1Q9UHK0 495 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 FBXO10Q9UK96 956 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TTLL8A6PVC2 850 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TSTD3H0UI37 97 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 H7C0S8 307 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CD3EAPO15446 510 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 GOT2P00505 430 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 GLAP06280 429 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 HMBSP08397 361 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SERPINF2P08697 491 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 FCER1AP12319 257 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SELLP14151 372 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NCF1P14598 390 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CRABP1P29762 137 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 QARSP47897 775 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 KCNJ1P48048 391 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NUMBP49757 651 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 EEFSECP57772 596 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SREBF2Q12772 1141 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TFDP2Q14188 446 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TOMM34Q15785 309 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CTF1Q16619 201 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 BMT2Q1RMZ1 405 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MZT2AQ6P582 158 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SHFQ7M4L6 423 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 STRADAQ7RTN6 431 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TRAM1L1Q8N609 369 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MFSD9Q8NBP5 474 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MZB1Q8WU39 189 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 PPP1R13LQ8WUF5 828 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MAFIPQ8WZ33 124 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SHC3Q92529 594 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CD101Q93033 1021 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NTAN1Q96AB6 310 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CCDC126Q96EE4 140 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 FAM89AQ96GI7 184 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ZC3HAV1LQ96H79 300 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 POP1Q99575 1024 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 LXNQ9BS40 222 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 KCNH6Q9H252 994 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 OSGEPL1Q9H4B0 414 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 LRRC4Q9HBW1 653 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 EML4Q9HC35 981 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 DUS2Q9NX74 493 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 GNG14A0A1W2PPG7 69 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SCAMP1O15126 338 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TCAPO15273 167 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SC5DO75845 299 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 IFNGP01579 166 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MPOP05164 745 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 PRPS2P11908 318 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 S100A2P29034 98 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TGM4P49221 684 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 RIDAP52758 137 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MYL7Q01449 175 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 GABPAQ06546 454 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NFX1Q12986 1120 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 STXBP2Q15833 593 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM31Q5JXX7 168 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 METAP1DQ6UB28 335 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 FAM198BQ6UWH4 519 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 SCARA5Q6ZMJ2 495 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF276Q8N554 614 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF527Q8NB42 609 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MCPH1Q8NEM0 835 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 EXOSC8Q96B26 276 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 KAZALD1Q96I82 304 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 NAT9Q9BTE0 207 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MIXL1Q9H2W2 232 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 CARS2Q9HA77 564 aaKnown RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MYOZ1Q9NP98 299 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 OSGEPQ9NPF4 335 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ASAH2Q9NR71 780 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF275Q9NSD4 429 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-201ENST00000338963 MTMR10Q9NXD2 777 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 OPTCQ9UBM4 332 aa4.09□□□□□ -1.75
NEDD4-201ENST00000338963 TNRQ92752 1358 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 A0A0B4J269 797 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 ERVV-1B6SEH8 477 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 GNGT2O14610 69 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 PDCD5O14737 125 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 LIASO43766 372 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 PIP5K1CO60331 668 aa4.09□□□□□ -1.76
NEDD4-201ENST00000338963 CHRM5P08912 532 aaPredicted RBP4.09□□□□□ -1.76
NEDD4-201ENST00000338963 HSD17B1P14061 328 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms