RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CLCN4P51793 760 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ALDH6A1Q02252 535 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 GPRC6AQ5T6X5 926 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CMTR2Q8IYT2 770 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SVOPQ8N4V2 548 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MGME1Q9BQP7 344 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 A0A088AWK7 358 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LOC730098B7Z3J9 87 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SEC24AO95486 1093 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NFATC2Q13469 925 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DENND5AQ6IQ26 1287 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RBM44Q6ZP01 1051 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PAGE2Q7Z2X7 111 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ANKRD46Q86W74 232 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 BEND7Q8N7W2 519 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 BPIFB1Q8TDL5 484 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CEP44Q9C0F1 390 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PNPLA3Q9NST1 481 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC42Q9Y546 428 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LIN7AO14910 233 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 EBLN1P0CF75 366 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 IDH2P48735 452 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DGKQP52824 942 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TRIM40Q6P9F5 258 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 HID1Q8IV36 788 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DNAJB8Q8NHS0 232 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF641Q96N77 438 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NME7Q9Y5B8 376 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3DA0A087WVF3 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3IA0A087WXS9 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3EA0A087X179 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3KA0A087X1G2 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3FA6NER0 549 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3LB9A6J9 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 H3BN98 237 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CACNB4O00305 520 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3HP0C7X1 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ATP1B2P14415 290 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FDXRP22570 491 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 S100A5P33763 92 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SSR2P43308 183 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 C2orf80Q0P641 193 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CEACAM7Q14002 265 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 C6orf136Q5SQH8 315 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NAIF1Q69YI7 327 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3GQ6DHY5 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 OR4F3Q6IEY1 312 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3CQ6IPX1 549 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D3Q8IZP1 549 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MPP4Q96JB8 637 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NSMCE3Q96MG7 304 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 OR2AG1Q9H205 316 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TREX1Q9NSU2 369 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 IL17CQ9P0M4 197 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MAST2Q6P0Q8 1798 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TRBC1P01850 177 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ENO2P09104 434 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 HOXB6P17509 224 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 VARSP26640 1264 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ATP4BP51164 291 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MAPK10P53779 464 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 GALNT1Q10472 559 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NEDD8Q15843 81 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FAM174BQ3ZCQ3 159 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ZC3H12BQ5HYM0 836 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ATAD3BQ5T9A4 648 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FRG2Q64ET8 278 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 GLMNQ92990 594 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TOP1MTQ969P6 601 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FRG2BQ96QU4 278 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DUSP12Q9UNI6 340 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 A0A1W2PP18 115 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 WNT9AO14904 365 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 IDSP22304 550 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 GSTT1P30711 240 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 HOXC13P31276 330 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CDKN2DP55273 166 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CYP4F2P78329 520 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 EMX2Q04743 252 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RUNX1T1Q06455 604 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ADGRE1Q14246 886 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ERICH5Q6P6B1 374 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 B3GNT6Q6ZMB0 384 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 OTUB2Q96DC9 234 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CXorf40BQ96DE9 158 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FAIM2Q9BWQ8 316 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SELENONQ9NZV5 590 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 VPS4AQ9UN37 437 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RUVBL1Q9Y265 456 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MAGEB17A8MXT2 336 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RAP2AP10114 183 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ADH5P11766 374 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ITGA2P17301 1181 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DEFB103AP81534 67 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TCEA2Q15560 299 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DPY19L1Q2PZI1 675 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms