RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF451Q9Y4E5 1061 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 NFKBIEO00221 500 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 MSI1O43347 362 aaKnown RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 NR2F6P10588 404 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 IL7P13232 177 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 NAT1P18440 290 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 PTPN9P43378 593 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 HSPA7P48741 367 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 HERVK_113P63132 956 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 VASH1Q7L8A9 365 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 CHMP1BQ7LBR1 199 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 IZUMO1Q8IYV9 350 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 ERVK-6Q9BXR3 956 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 POLR2J2Q9GZM3 115 aaKnown RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 BEX1Q9HBH7 125 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 CITO14578 2027 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 HOXC6P09630 235 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 TGFB3P10600 412 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 ARF4P18085 180 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 DCDC1P59894 354 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 NIPAL4Q0D2K0 466 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 BOP1Q14137 746 aaKnown RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 DOK6Q6PKX4 331 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 FAM217AQ8IXS0 508 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 GOLM1Q8NBJ4 401 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 OR4L1Q8NH43 312 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 MMP28Q9H239 520 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 PRDM8Q9NQV8 689 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 CNTN5O94779 1100 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 TNNI3P19429 210 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 HTR1BP28222 390 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 SHMT2P34897 504 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 RACK1P63244 317 aaKnown RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 DSC2Q02487 901 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 PUDPQ08623 228 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 ADCK2Q7Z695 626 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 FAM9CQ8IZT9 166 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 PMEPA1Q969W9 287 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 COLEC11Q9BWP8 271 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 MROQ9BYG7 248 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 IPPKQ9H8X2 491 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 IL1RAPQ9NPH3 570 aa13.04□□□□□ -0.32
COL2A1-201ENST00000337299 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-201ENST00000337299 A0A1W2PQ67 120 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 FAM234BA2RU67 622 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 UPK1BO75841 260 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 LRP8Q14114 963 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 STARD3Q14849 445 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF648Q5T619 568 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ADGRG5Q8IZF4 528 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 LIX1Q8N485 282 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 FADS2P1A8MWK0 482 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 GPR182O15218 404 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 OTCP00480 354 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 PGK1P00558 417 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 UROSP10746 265 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 EPB42P16452 691 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ENDOUP21128 410 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SLC6A2P23975 617 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 GNPDA1P46926 289 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 RHAGQ02094 409 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 BICRALQ6AI39 1079 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF613Q6PF04 617 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 MED8Q96G25 268 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 TNKS2Q9H2K2 1166 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 TLR8Q9NR97 1041 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 TOPAZ1Q8N9V7 1692 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 IFNA14P01570 189 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 G6PDP11413 515 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 LMO2P25791 158 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF45Q02386 682 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ZMYND11Q15326 602 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms