RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CPXM1Q96SM3 734 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 GPN1Q9HCN4 374 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 SNX4O95219 450 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 PRR5P85299 388 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 KIAA1161Q6NSJ0 714 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 GPAT4Q86UL3 456 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 VSIG10LQ86VR7 867 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CPNE9Q8IYJ1 553 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 THEM6Q8WUY1 208 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ADAP2Q9NPF8 381 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ARHGEF4Q9NR80 690 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 FBXL3Q9UKT7 428 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 FARSAQ9Y285 508 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 ZMYM2Q9UBW7 1377 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ZNF536O15090 1300 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 TNFP01375 233 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CHIT1Q13231 466 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLN8-201ENST00000331222 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 HAS1Q92839 578 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 SIPA1Q96FS4 1042 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 KCNC2Q96PR1 638 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 TBL1XR1Q9BZK7 514 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 MTRRQ9UBK8 725 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 POU2F3Q9UKI9 436 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CH25HO95992 272 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 C8orf89P0DMQ9 161 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 DGKGP49619 791 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CDK9P50750 372 aaKnown RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 CARD17Q5XLA6 110 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 MCFD2Q8NI22 146 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 DNAJA4Q8WW22 397 aaPredicted RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 ASB12Q8WXK4 309 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TRIM43Q96BQ3 446 aaPredicted RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 HSFY1Q96LI6 401 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 GLOD4Q9HC38 313 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 DIP2BQ9P265 1576 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ALPIP09923 528 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 NOMO3P69849 1222 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ID2Q02363 134 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CREB5Q02930 508 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TARDBPQ13148 414 aaKnown RBP eCLIP10.41□□□□□ -0.743e-13■■■■□ 23.5
CLN8-201ENST00000331222 NOMO1Q15155 1222 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 SLC24A5Q71RS6 500 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 OR8H3Q8N146 312 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TMEM145Q8NBT3 493 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CKAP2Q8WWK9 683 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TBC1D14Q9P2M4 693 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 IFT52Q9Y366 437 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 SLC38A8A6NNN8 435 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CDC7O00311 574 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CACNG1Q06432 222 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 SYVN1Q86TM6 617 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 SLC51AQ86UW1 340 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 FAM47BQ8NA70 645 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PROKR2Q8NFJ6 384 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TESCQ96BS2 214 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PRICKLE1Q96MT3 831 aaPredicted RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 ZNF670Q9BS34 389 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PCDH18Q9HCL0 1135 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TVP23BQ9NYZ1 205 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 C15orf41Q9Y2V0 281 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 C2CD2Q9Y426 696 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 OR51F1A6NGY5 319 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 CLEC3AO75596 197 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ITGA5P08648 1049 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 FMO3P31513 532 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 MTTPP55157 894 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 SNU13P55769 128 aaKnown RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 CCL14Q16627 93 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TMEM156Q8N614 296 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 KBTBD8Q8NFY9 601 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 NLGN4YQ8NFZ3 816 aaPredicted RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 GIPC3Q8TF64 312 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 STYXQ8WUJ0 223 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 KAZALD1Q96I82 304 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 MMADHCQ9H3L0 296 aaPredicted RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 SLC17A6Q9P2U8 582 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 DEPDC5O75140 1603 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PRAMEF33A0A0G2JMD5 474 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 FADS2P1A8MWK0 482 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 INSIG1O15503 277 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PRAMEF10O60809 474 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 NOL4O94818 638 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 OR4F21O95013 312 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 FGF19O95750 216 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ELP6Q0PNE2 266 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ARFRP1Q13795 201 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 EIF2S3LQ2VIR3 472 aaKnown RBP10.41□□□□□ -0.74
CLN8-201ENST00000331222 CEP97Q8IW35 865 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 OR5T2Q8NGG2 359 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 PIGXQ8TBF5 258 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 NUS1Q96E22 293 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TMED9Q9BVK6 235 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 TCF7L1Q9HCS4 588 aa10.41□□□□□ -0.74
CLN8-201ENST00000331222 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms