RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ALDH3A2P51648 485 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CYP4F2P78329 520 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CYP4F3Q08477 520 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 PLD1Q13393 1074 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SEMA5AQ13591 1074 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 KCNC3Q14003 757 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 DAG1Q14118 895 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 FLYWCH1Q4VC44 716 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SYT6Q5T7P8 510 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 DENND1BQ6P3S1 775 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 OR9I1Q8NGQ6 314 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SEPHS2Q99611 448 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CNPY3Q9BT09 278 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 CEP41Q9BYV8 373 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 AMBRA1Q9C0C7 1298 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 MID2Q9UJV3 735 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 ANAPC2Q9UJX6 822 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
SHMT2-201ENST00000328923 SLCO1B7G3V0H7 640 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 UGT2B17O75795 530 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 NCK1P16333 377 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RAP1GAPP47736 663 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 MEOX2P50222 304 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 UGT2B15P54855 530 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FLI1Q01543 452 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 LCN8Q6JVE9 175 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FAM45BPQ6NSW5 357 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 DPP9Q86TI2 863 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 KCT2Q8NC54 265 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 OR6M1Q8NGM8 313 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 GOT1L1Q8NHS2 421 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FAM45AQ8TCE6 357 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 USP7Q93009 1102 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RBPMSQ93062 196 aaKnown RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PYCR2Q96C36 320 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PEBP4Q96S96 227 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FAM129BQ96TA1 746 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 SORBS1Q9BX66 1292 aaKnown RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RAPGEFL1Q9UHV5 662 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 DTX4Q9Y2E6 619 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PCDHGB1Q9Y5G3 927 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PMPCBO75439 489 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 STBD1O95210 358 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 CDK1P06493 297 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 F7P08709 466 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 KCNC1P48547 511 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 GLUD2P49448 558 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 KCNK10P57789 538 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 SSTP61278 116 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 ANKRD34AQ69YU3 496 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 TFAP2EQ6VUC0 442 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RETREG3Q86VR2 466 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 ATAD1Q8NBU5 361 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 ENKURQ8TC29 256 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 REPS1Q96D71 796 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 NPAS1Q99742 590 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FEM1AQ9BSK4 669 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 HAPLN2Q9GZV7 340 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 NXF2Q9GZY0 626 aaKnown RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 AASSQ9UDR5 926 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 ACAD8Q9UKU7 415 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RAB23Q9ULC3 237 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 PCDHA10Q9Y5I2 948 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 RLFQ13129 1914 aa11.65□□□□□ -0.54
SHMT2-201ENST00000328923 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-201ENST00000328923 A0A1W2PP18 115 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 RPS10-NUDT3A0A1W2PQS6 291 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 AHSGP02765 367 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SNRPB2P08579 225 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 KPNA2P52292 529 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SOX10P56693 466 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 BCAR1P56945 870 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TRIP4Q15650 581 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SYT16Q17RD7 645 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TUSC1Q2TAM9 212 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TRIM60Q495X7 471 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 KDELC1Q6UW63 502 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 RNF180Q86T96 592 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 JAZF1Q86VZ6 243 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 EMC1Q8N766 993 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 AMER2Q8N7J2 671 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms