RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 XPNPEP3Q9NQH7 507 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM9Q9P0T7 183 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 OR5F1O95221 314 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 CD44P16070 742 aaKnown RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 MAGEB1P43366 347 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TAS2R39P59534 338 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ART4Q93070 314 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ROPN1LQ96C74 230 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ACBD6Q9BR61 282 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 UGT2B17O75795 530 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 RAB3DO95716 219 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 LPOP22079 712 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 GRIA4P48058 902 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 NFAT5O94916 1531 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ERVK-8P63133 956 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 SH2D3AQ9BRG2 576 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 PAPOLGQ9BWT3 736 aaKnown RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 NPLQ9BXD5 320 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TCF7L1Q9HCS4 588 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ASAH2Q9NR71 780 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 BCAS1O75363 584 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ADH1CP00326 375 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 IFNA21P01568 189 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 HCKP08631 526 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 RPA3P35244 121 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 NME5P56597 212 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 GSCP56915 257 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 RAB8AP61006 207 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ZSWIM3Q96MP5 696 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ACE2Q9BYF1 805 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ACTR6Q9GZN1 396 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CACNA1CQ13936 2221 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 C5orf60A6NFR6 353 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CHURC1-FNTBB4DL54 471 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 BMPR2Q13873 1038 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CHSY3Q70JA7 882 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 RHOJQ9H4E5 214 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 DOCK9Q9BZ29 2069 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 LIASO43766 372 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CELF2O95319 508 aaKnown RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 BPNT1O95861 308 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 UGT2B4P06133 528 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 TPSB2P20231 275 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 TPSAB1Q15661 275 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CLVS2Q5SYC1 327 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SVOPLQ8N434 492 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CNTD1Q8N815 330 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 MARCH10Q8NA82 808 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 DPAGT1Q9H3H5 408 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SCGB1D1O95968 90 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 RARAP10276 462 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SLC2A2P11168 524 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 INSRRP14616 1297 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 KCTD19Q17RG1 926 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ANKRD52Q8NB46 1076 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PLEKHO2Q8TD55 490 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 NXPE2Q96DL1 559 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CD320Q9NPF0 282 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SLC15A1P46059 708 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PIK3R6Q5UE93 754 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 FBXO16Q8IX29 292 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 TOP6BLQ8N6T0 577 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 GLB1L3Q8NCI6 653 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 KLK14Q9P0G3 267 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PTBP2Q9UKA9 531 aaKnown RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 IQCMA0A1B0GVH7 501 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SSTR1P30872 391 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SLC1A3P43003 542 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 IDH2P48735 452 aaKnown RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SNAPC1Q16533 368 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 FAM198BQ6UWH4 519 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 GPR180Q86V85 440 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 EBNA1BP2Q99848 306 aaKnown RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 NXF3Q9H4D5 531 aaKnown RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 GBA2Q9HCG7 927 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 MTRRQ9UBK8 725 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 IMPA2O14732 288 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 DFNA5O60443 496 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 OAZ2O95190 189 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ZBTB7AO95365 584 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 JUNDP17535 347 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 DGKQP52824 942 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF460Q14592 562 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CES5AQ6NT32 575 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PAMR1Q6UXH9 720 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 FDXACB1Q9BRP7 624 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms