RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 DPF1Q92782 380 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 ZKSCAN4Q969J2 545 aaPredicted RBP13.01□□□□□ -0.33
AFF3-201ENST00000317233 TMCO6Q96DC7 493 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 SRMSQ9H3Y6 488 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 SLC28A3Q9HAS3 691 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 HAO2Q9NYQ3 351 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 DGKBQ9Y6T7 804 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
AFF3-201ENST00000317233 IFNA5P01569 189 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 GRIA2P42262 883 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 PSPHP78330 225 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 SLC6A3Q01959 620 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 CRTC2Q53ET0 693 aaPredicted RBP13.01□□□□□ -0.33
AFF3-201ENST00000317233 OR7G1Q8NGA0 311 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 SEMA3CQ99985 751 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 DEC1Q9P2X7 70 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 DKKL1Q9UK85 242 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
AFF3-201ENST00000317233 ATP6AP2A0A1C7CYW4 349 aa13□□□□□ -0.33
AFF3-201ENST00000317233 H7C2Y5 167 aa13□□□□□ -0.33
AFF3-201ENST00000317233 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 PIP5K1BO14986 540 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ATP6V0D1P61421 351 aa13□□□□□ -0.33
AFF3-201ENST00000317233 SBK1Q52WX2 424 aa13□□□□□ -0.33
AFF3-201ENST00000317233 C1orf94Q6P1W5 598 aa13□□□□□ -0.33
AFF3-201ENST00000317233 SAMD14Q8IZD0 417 aaPredicted RBP13□□□□□ -0.33
AFF3-201ENST00000317233 IFI30P13284 250 aa13□□□□□ -0.33
AFF3-201ENST00000317233 CSTF2P33240 577 aaKnown RBP eCLIP13□□□□□ -0.33
AFF3-201ENST00000317233 ZNF81P51508 661 aa13□□□□□ -0.33
AFF3-201ENST00000317233 RAB31Q13636 194 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ASTE1Q2TB18 679 aaPredicted RBP13□□□□□ -0.33
AFF3-201ENST00000317233 SPATA19Q7Z5L4 167 aa13□□□□□ -0.33
AFF3-201ENST00000317233 OR52J3Q8NH60 311 aa13□□□□□ -0.33
AFF3-201ENST00000317233 STK32AQ8WU08 396 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 CYP3A7-CYP3A51PA0A087WV96 503 aa13□□□□□ -0.33
AFF3-201ENST00000317233 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
AFF3-201ENST00000317233 AGPSO00116 658 aa13□□□□□ -0.33
AFF3-201ENST00000317233 CYP3A7P24462 503 aa13□□□□□ -0.33
AFF3-201ENST00000317233 MPIP34949 423 aa13□□□□□ -0.33
AFF3-201ENST00000317233 GNG2P59768 71 aa13□□□□□ -0.33
AFF3-201ENST00000317233 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
AFF3-201ENST00000317233 GTPBP2Q9BX10 602 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
AFF3-201ENST00000317233 RPL36Q9Y3U8 105 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 FABP3P05413 133 aa13□□□□□ -0.33
AFF3-201ENST00000317233 EPHX1P07099 455 aa13□□□□□ -0.33
AFF3-201ENST00000317233 KIR3DL1P43629 444 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ARL9Q6T311 187 aa13□□□□□ -0.33
AFF3-201ENST00000317233 VCPIP1Q96JH7 1222 aa13□□□□□ -0.33
AFF3-201ENST00000317233 EHD4Q9H223 541 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ANKRA2Q9H9E1 313 aa13□□□□□ -0.33
AFF3-201ENST00000317233 PRELID1Q9Y255 219 aa13□□□□□ -0.33
AFF3-201ENST00000317233 A0A1W2PRQ8 180 aa13□□□□□ -0.33
AFF3-201ENST00000317233 ARGFXA6NJG6 315 aa13□□□□□ -0.33
AFF3-201ENST00000317233 A8MVJ9 347 aa13□□□□□ -0.33
AFF3-201ENST00000317233 RAD51DO75771 328 aa13□□□□□ -0.33
AFF3-201ENST00000317233 GLUD1P00367 558 aa13□□□□□ -0.33
AFF3-201ENST00000317233 RARAP10276 462 aa13□□□□□ -0.33
AFF3-201ENST00000317233 RAC2P15153 192 aa13□□□□□ -0.33
AFF3-201ENST00000317233 MC4RP32245 332 aa13□□□□□ -0.33
AFF3-201ENST00000317233 EEF1A1P68104 462 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 EEF1A1P5Q5VTE0 462 aa13□□□□□ -0.33
AFF3-201ENST00000317233 HAGHLQ6PII5 290 aaPredicted RBP13□□□□□ -0.33
AFF3-201ENST00000317233 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
AFF3-201ENST00000317233 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
AFF3-201ENST00000317233 HELQQ8TDG4 1101 aa13□□□□□ -0.33
AFF3-201ENST00000317233 TM9SF4Q92544 642 aa13□□□□□ -0.33
AFF3-201ENST00000317233 CERS2Q96G23 380 aa13□□□□□ -0.33
AFF3-201ENST00000317233 DNTTIP1Q9H147 329 aa13□□□□□ -0.33
AFF3-201ENST00000317233 SEMA6CQ9H3T2 930 aa13□□□□□ -0.33
AFF3-201ENST00000317233 LRTM1Q9HBL6 345 aa13□□□□□ -0.33
AFF3-201ENST00000317233 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 FARS2O95363 451 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 NFATC1O95644 943 aa13□□□□□ -0.33
AFF3-201ENST00000317233 EIF1AXP47813 144 aaKnown RBP13□□□□□ -0.33
AFF3-201ENST00000317233 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
AFF3-201ENST00000317233 CDH15P55291 814 aa13□□□□□ -0.33
AFF3-201ENST00000317233 USP51Q70EK9 711 aa13□□□□□ -0.33
AFF3-201ENST00000317233 C12orf40Q86WS4 652 aa13□□□□□ -0.33
AFF3-201ENST00000317233 TCF12Q99081 682 aa13□□□□□ -0.33
AFF3-201ENST00000317233 CMKLR1Q99788 373 aa13□□□□□ -0.33
AFF3-201ENST00000317233 WDR77Q9BQA1 342 aaPredicted RBP13□□□□□ -0.33
AFF3-201ENST00000317233 SLC7A11Q9UPY5 501 aa13□□□□□ -0.33
AFF3-201ENST00000317233 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
AFF3-201ENST00000317233 MT-CO2P00403 227 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 INSRRP14616 1297 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
AFF3-201ENST00000317233 SAMD7Q7Z3H4 446 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 RRAGCQ9HB90 399 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 EFCAB9A8MZ26 197 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 MEIS2O14770 477 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 ZNF41P51814 821 aaPredicted RBP12.99□□□□□ -0.33
AFF3-201ENST00000317233 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
AFF3-201ENST00000317233 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms