RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SLC18A1P54219 525 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 MLLT6P55198 1093 aaPredicted RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 ACTR3P61158 418 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ERVK-8P63133 956 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ROR2Q01974 943 aaKnown RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 RHAGQ02094 409 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 HSPB3Q12988 150 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 KHDC1Q4VXA5 237 aaKnown RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 SLC9B1Q4ZJI4 515 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 TMPRSS11AQ6ZMR5 421 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 EBF4Q9BQW3 602 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ZDHHC3Q9NYG2 299 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 HEBP2Q9Y5Z4 205 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 OR5F1O95221 314 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 MT-ND1P03886 318 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 LRRC73Q5JTD7 316 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 WDR12Q9GZL7 423 aaKnown RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 POMPQ9Y244 141 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 UBE2QL1A1L167 161 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 WNT9AO14904 365 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 ZNF358Q9NW07 568 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 SCN11AQ9UI33 1791 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 H3BNX3 289 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 PGRMC2O15173 223 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 ANGPTL1O95841 491 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 NCK1P16333 377 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 CD247P20963 164 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 IGFALSP35858 605 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 RAPSNQ13702 412 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 AMZ2Q86W34 360 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 OR52J3Q8NH60 311 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 NUS1Q96E22 293 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 MIPEPQ99797 713 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 RAB11FIP5Q9BXF6 653 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 ZNF282Q9UDV7 671 aaPredicted RBP15.68■□□□□ 0.1
USP42-201ENST00000306177 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 CXorf49A8MYA2 514 aaPredicted RBP15.68■□□□□ 0.1
USP42-201ENST00000306177 TP73O15350 636 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 SLC31A1O15431 190 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 CHST10O43529 356 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 NIPSNAP2O75323 286 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 ARNTL2Q8WYA1 636 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 CASKO14936 926 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 MPZL2O60487 215 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 SLCO6A1Q86UG4 719 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 PEX5LQ8IYB4 626 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 MCFD2Q8NI22 146 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 C1GALT1C1Q96EU7 318 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 DPEP2Q9H4A9 486 aa15.68■□□□□ 0.1
USP42-201ENST00000306177 J3KR12 359 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 TNFRSF21O75509 655 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 PEX2P28328 305 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 IL12AP29459 219 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 CCR10P46092 362 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 OMPP47874 163 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 CCNIQ14094 377 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 GIPC3Q8TF64 312 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 C12orf66Q96MD2 445 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 TAS2R1Q9NYW7 299 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 IL36AQ9UHA7 158 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 NEMP2A6NFY4 417 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 HSD17B2P37059 387 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 HERC3Q15034 1050 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 PTGES3Q15185 160 aaKnown RBP15.67■□□□□ 0.1
USP42-201ENST00000306177 TAS1R3Q7RTX0 852 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 JAZF1Q86VZ6 243 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 PTPN18Q99952 460 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 SRMSQ9H3Y6 488 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 CCDC85CA6NKD9 419 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 MATN4O95460 622 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 ALAS2P22557 587 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 DDX6P26196 483 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP42-201ENST00000306177 SEMG2Q02383 582 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 GALNT2Q10471 571 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 GRSF1Q12849 480 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP42-201ENST00000306177 SAMD14Q8IZD0 417 aaPredicted RBP15.67■□□□□ 0.1
USP42-201ENST00000306177 HDDC3Q8N4P3 179 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 FAM156AQ8NDB6 213 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 DUSP26Q9BV47 211 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
USP42-201ENST00000306177 LYNP07948 512 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 TFPIP10646 304 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 PTX3P26022 381 aaPredicted RBP15.67■□□□□ 0.1
USP42-201ENST00000306177 MAT2AP31153 395 aaKnown RBP15.67■□□□□ 0.1
USP42-201ENST00000306177 ZNF33AQ06730 810 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 MBLAC2Q68D91 279 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 OR10H5Q8NGA6 315 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 SMOQ99835 787 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 KIFC1Q9BW19 673 aa15.67■□□□□ 0.1
USP42-201ENST00000306177 A8MT66 165 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 PDPK1O15530 556 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 CCNB2O95067 398 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 UGT1A6P19224 532 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 UGT1A1P22309 533 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 UGT1A4P22310 534 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 UGT1A3P35503 534 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ACVRL1P37023 503 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms