RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 OR4E2Q8NGC2 313 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 USP7Q93009 1102 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 C9orf72Q96LT7 481 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 PPM1MQ96MI6 270 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 IARS2Q9NSE4 1012 aaKnown RBP17.74■□□□□ 0.43
SPSB3-201ENST00000301717 GNPTGQ9UJJ9 305 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 CDC23Q9UJX2 597 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 RUVBL2Q9Y230 463 aaKnown RBP17.74■□□□□ 0.43
SPSB3-201ENST00000301717 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
SPSB3-201ENST00000301717 EFCAB7A8K855 629 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 CDRT15L2A8MXV6 281 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 C9orf172C9J069 976 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 PRAMEF10O60809 474 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 S1PR4O95977 384 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 C9P02748 559 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ITGA2BP08514 1039 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ERVK-10P10266 1014 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ITPKBP27987 946 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 CSTF2P33240 577 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPSB3-201ENST00000301717 EIF3IQ13347 325 aaKnown RBP17.73■□□□□ 0.43
SPSB3-201ENST00000301717 DNAJC21Q5F1R6 531 aaKnown RBP17.73■□□□□ 0.43
SPSB3-201ENST00000301717 C19orf48Q6RUI8 117 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 PLXDC1Q8IUK5 500 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 OR52E1Q8NGJ3 308 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 CFAP61Q8NHU2 1237 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 FGF11Q92914 225 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ART4Q93070 314 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 TMEM159Q96B96 161 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ZNF578Q96N58 590 aaPredicted RBP17.73■□□□□ 0.43
SPSB3-201ENST00000301717 DPYSL5Q9BPU6 564 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ERP44Q9BS26 406 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 CARD6Q9BX69 1037 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 EPB41L1Q9H4G0 881 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 ASF1AQ9Y294 204 aa17.73■□□□□ 0.43
SPSB3-201ENST00000301717 KRT87PA6NCN2 255 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 FAM187AA6NFU0 413 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 HGSO14964 777 aaPredicted RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 GPC4O75487 556 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 RASSF9O75901 435 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 GSTM1P09488 218 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 OGNP20774 298 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 RPS3P23396 243 aaKnown RBP eCLIP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 AOAHP28039 575 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SLC5A2P31639 672 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 EIF2S3P41091 472 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 GSTM4Q03013 218 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ABRQ12979 859 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TRA2AQ13595 282 aaKnown RBP eCLIP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 HIF1AQ16665 826 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ZNF549Q6P9A3 640 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TRMT10BQ6PF06 316 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 IGF2-ASQ6U949 168 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 UNC5AQ6ZN44 842 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 KCNMB4Q86W47 210 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 LSMEM2Q8N112 164 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 PDIK1LQ8N165 341 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 AGBL5Q8NDL9 886 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SNIP1Q8TAD8 396 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 CRELD1Q96HD1 420 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SLC30A3Q99726 388 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 CTRCQ99895 268 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 THSD1Q9NS62 852 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 HRASLS2Q9NWW9 162 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 GRHL1Q9NZI5 618 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TDRKHQ9Y2W6 561 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 COLEC10Q9Y6Z7 277 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ITPR1Q14643 2758 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 AHCTF1Q8WYP5 2266 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 OR5K3A6NET4 321 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 KRT37O76014 449 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TPBGLP0DKB5 382 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 POLR2CP19387 275 aaPredicted RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 CD151P48509 253 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SH3BP2P78314 561 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SLC7A5Q01650 507 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ARMC3Q5W041 872 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 DUPD1Q68J44 220 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ZNF449Q6P9G9 518 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 CNSTQ6PJW8 725 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ZNF572Q7Z3I7 529 aaPredicted RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 CLEC14AQ86T13 490 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 SLC22A15Q8IZD6 547 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ACVR1CQ8NER5 493 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 HNRNPLLQ8WVV9 542 aaKnown RBP17.72■□□□□ 0.43
SPSB3-201ENST00000301717 LCN9Q8WX39 176 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 APMAPQ9HDC9 416 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 WDR70Q9NW82 654 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 ICKQ9UPZ9 632 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 HEBP2Q9Y5Z4 205 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 NFS1Q9Y697 457 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 TEX264Q9Y6I9 313 aa17.72■□□□□ 0.43
SPSB3-201ENST00000301717 IGHV5-51A0A0C4DH38 117 aa17.71■□□□□ 0.43
SPSB3-201ENST00000301717 BTN3A3O00478 584 aa17.71■□□□□ 0.43
SPSB3-201ENST00000301717 HAUS5O94927 633 aa17.71■□□□□ 0.43
SPSB3-201ENST00000301717 APOA4P06727 396 aa17.71■□□□□ 0.43
SPSB3-201ENST00000301717 PKMP14618 531 aaKnown RBP17.71■□□□□ 0.43
SPSB3-201ENST00000301717 ARL4CP56559 192 aa17.71■□□□□ 0.43
SPSB3-201ENST00000301717 PCBP4P57723 403 aaKnown RBP17.71■□□□□ 0.43
SPSB3-201ENST00000301717 ERVPABLB-1P60509 514 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms