RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SPATA31D3P0C874 917 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 HTR2AP28223 471 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FMO3P31513 532 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MPP2Q14168 576 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PUM1Q14671 1186 aaKnown RBP eCLIP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FAM76BQ5HYJ3 339 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 LRRC38Q5VT99 294 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 SPATA31D4Q6ZUB0 917 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 UFD1Q92890 307 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 P2RY11Q96G91 374 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ACO2Q99798 780 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 TMEM134Q9H6X4 195 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ADM5C9JUS6 153 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 EPHB6O15197 1021 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 NME6O75414 186 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 TMBIM6P55061 237 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CDH11P55287 796 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CDH12P55289 794 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CELF3Q5SZQ8 465 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 HECTD2Q5U5R9 776 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 HDDC3Q8N4P3 179 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF366Q8N895 744 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 XAGE5Q8WWM1 108 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 AGO3Q9H9G7 860 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 RRAGCQ9HB90 399 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CNTNAP1P78357 1384 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ADAMDEC1O15204 470 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CYB5AP00167 134 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 AKR1A1P14550 325 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 NT5EP21589 574 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 SLC5A3P53794 718 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CNPY1Q3B7I2 92 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 KLHL22Q53GT1 634 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FAM46CQ5VWP2 391 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 C9orf131Q5VYM1 1079 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 INTS5Q6P9B9 1019 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 UNC93AQ86WB7 457 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 C9orf43Q8TAL5 461 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FARSBQ9NSD9 589 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MAGED1Q9Y5V3 778 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 TBX1O43435 398 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MYCLP1P12525 358 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MAGEA3P43357 314 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MASP1P48740 699 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PSEN1P49768 467 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FZD1Q9UP38 647 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 GLTPD2A6NH11 291 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CXCR6O00574 342 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 SMAD9O15198 467 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MFSD11O43934 449 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 OR1I1O60431 355 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PEX14O75381 377 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 GPIP06744 558 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ALAS2P22557 587 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PEX2P28328 305 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PRKCDQ05655 676 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MAPK14Q16539 360 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PPM1JQ5JR12 505 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 METTL21CQ5VZV1 264 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 CYP4V2Q6ZWL3 525 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 LDB1Q86U70 411 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FBXO15Q8NCQ5 510 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 DENND2DQ9H6A0 471 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 NUDT4Q9NZJ9 180 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ERVK-11Q9UQG0 969 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MAU2Q9Y6X3 613 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 NRCAMQ92823 1304 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF99A8MXY4 864 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 OR1F1O43749 312 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 RPS2P15880 293 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF3P17036 446 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 GPR158Q5T848 1215 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 RBM23Q86U06 439 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ANKFN1Q8N957 763 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 FNDC8Q8TC99 324 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 KAT2AQ92830 837 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PIWIL1Q96J94 861 aaKnown RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 NODALQ96S42 347 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 DUSP16Q9BY84 665 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 RHOJQ9H4E5 214 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 ANKRA2Q9H9E1 313 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 BRD7Q9NPI1 651 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 RCOR3Q9P2K3 495 aaPredicted RBP5.48□□□□□ -1.53
CPSF2-201ENST00000298875 MTRRQ9UBK8 725 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PCDHB9Q9Y5E1 797 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
CPSF2-201ENST00000298875 IQCF5A8MTL0 148 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 H3BM21 787 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PCDHGA12O60330 932 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CLPXO76031 633 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 FCER2P06734 321 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 LINGO3P0C6S8 592 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ASMTP46597 345 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PSMD8P48556 350 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 C2orf80Q0P641 193 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TIGD6Q17RP2 521 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 RASGEF1AQ8N9B8 481 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TERB2Q8NHR7 220 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 HEXDCQ8WVB3 486 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 METTL21AQ8WXB1 218 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms