RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 NDUFA13Q9P0J0 144 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS8-201ENST00000287546 AURKCQ9UQB9 309 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 MCIDASD6RGH6 385 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 MTRF1O75570 445 aaKnown RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 IGLV3-27P01718 113 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CHRNGP07510 517 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CTSAP10619 480 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 ZNF37AP17032 561 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 TCN1P20061 433 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 ATP4BP51164 291 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 MBTPS1Q14703 1052 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 VWA5B1Q5TIE3 1220 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 TXNDC8Q6A555 127 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 RAET1GQ6H3X3 334 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 OGFOD2Q6N063 350 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 ARMCX6Q7L4S7 300 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 BHLHA9Q7RTU4 235 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 ZBTB2Q8N680 514 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 TWIST2Q8WVJ9 160 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 SLC7A6OSQ96CW6 309 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 ECSITQ9BQ95 431 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 FEM1AQ9BSK4 669 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CCDC106Q9BWC9 280 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 KLF16Q9BXK1 252 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 DPY30Q9C005 99 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 OSER1Q9NX31 292 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 NKIRAS2Q9NYR9 191 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 RNASEH2AO75792 299 aaKnown RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 PCNAP12004 261 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CDH3P22223 829 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 FDXRP22570 491 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 DPP6P42658 865 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 MINDY4Q4G0A6 757 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CCDC92Q53HC0 331 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 SULT1C3Q6IMI6 304 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 IL27RAQ6UWB1 636 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CLEC14AQ86T13 490 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 SERPINA9Q86WD7 417 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 CPXM2Q8N436 756 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 AVL9Q8NBF6 648 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 IPCEF1Q8WWN9 437 aaPredicted RBP6.82□□□□□ -1.32
VPS8-201ENST00000287546 REPS1Q96D71 796 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 ZNF778Q96MU6 729 aa6.82□□□□□ -1.32
VPS8-201ENST00000287546 NPEPPSL1A6NEC2 478 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 NEDD8-MDP1E9PL57 170 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 G3V2L1 256 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CCL22O00626 93 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 LIN7AO14910 233 aaPredicted RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 TIMP1P01033 207 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CBSLP0DN79 551 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 ATF6P18850 670 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CBSP35520 551 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CYP4F8P98187 520 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ADRM1Q16186 407 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 SLC9B1Q4ZJI4 515 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 TCEAL6Q6IPX3 200 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 FBXO46Q6PJ61 603 aaPredicted RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 BRAT1Q6PJG6 821 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ENDOVQ8N8Q3 282 aaKnown RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 ATP6V1C2Q8NEY4 427 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 OR14C36Q8NHC7 312 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ARRDC2Q8TBH0 407 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 SH3RF2Q8TEC5 729 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 TRIB3Q96RU7 358 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 S100A14Q9HCY8 104 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 IL23AQ9NPF7 189 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 PSMD13Q9UNM6 376 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 TAF4O00268 1085 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CCL16O15467 120 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 SNAP91O60641 907 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 DNAJA2O60884 412 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ULK1O75385 1050 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 PGLSO95336 258 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 TOP3BO95985 862 aaKnown RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 GSTM1P09488 218 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 HNRNPA1P09651 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS8-201ENST00000287546 SLC35G4P0C7Q5 338 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 SPATA31D3P0C874 917 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ZNF30P17039 623 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ITPKBP27987 946 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ARCN1P48444 511 aaKnown RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 AMZ1Q400G9 498 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CARD16Q5EG05 197 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 PDE12Q6L8Q7 609 aaKnown RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CYP20A1Q6UW02 462 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS8-201ENST00000287546 SPATA31D4Q6ZUB0 917 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ZNF227Q86WZ6 799 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 MAGED4Q96JG8 741 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 ZNF641Q96N77 438 aaPredicted RBP6.81□□□□□ -1.32
VPS8-201ENST00000287546 HEPHQ9BQS7 1158 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 CLSTN3Q9BQT9 956 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 SUV39H2Q9H5I1 410 aa6.81□□□□□ -1.32
VPS8-201ENST00000287546 C8orf4Q9NR00 106 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms