RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SLC22A3O75751 556 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 AOAHP28039 575 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 IL12AP29459 219 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 AQP4P55087 323 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 TANGO2Q6ICL3 276 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 SULT1C3Q6IMI6 304 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 MMAAQ8IVH4 418 aaKnown RBP17.57■□□□□ 0.4
CAPN1-201ENST00000279247 STON2Q8WXE9 905 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 P2RY13Q9BPV8 354 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 SLC28A3Q9HAS3 691 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 AIG1Q9NVV5 245 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 ZNF490Q9ULM2 529 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-201ENST00000279247 V9GYQ6 96 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 NUMA1Q14980 2115 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 PLXNB3Q9ULL4 1909 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 CFAP99D6REC4 459 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 K7EPI3 171 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 FSHRP23945 695 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 ACADVLP49748 655 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 TRIM25Q14258 630 aaKnown RBP17.57■□□□□ 0.4
CAPN1-201ENST00000279247 ZXDCQ2QGD7 858 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-201ENST00000279247 SYTL3Q4VX76 610 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 XKR7Q5GH72 579 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 ASB16Q96NS5 453 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 ECSITQ9BQ95 431 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 SLC22A14Q9Y267 594 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 CCDC154A6NI56 674 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 RB1P06400 928 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 PSMC3P17980 439 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ERVK-8P63133 956 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 PTCHD3Q3KNS1 767 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ANO7Q6IWH7 933 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 SLC2A7Q6PXP3 512 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 LIPIQ6XZB0 460 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 DNAJC14Q6Y2X3 702 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 RAVER1Q8IY67 606 aaKnown RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 GALNT4Q8N4A0 578 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ZNF557Q8N988 423 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 FAM110BQ8TC76 370 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 LRGUKQ96M69 825 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 MARK1Q9P0L2 795 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 EPS15L1Q9UBC2 864 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 A0A1W2PQ67 120 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 TPST1O60507 370 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ERAP2Q6P179 960 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 PQLC1Q8N2U9 271 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 PIP4K2CQ8TBX8 421 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 SMARCD2Q92925 531 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 DOCK9Q9BZ29 2069 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 USP34Q70CQ2 3546 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ZNF839A8K0R7 811 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 NME4O00746 187 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ACOT8O14734 319 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 MMP20O60882 483 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ULK1O75385 1050 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 BCAS2O75934 225 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ACADSP16219 412 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 GRIA3P42263 894 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 POLR2JP52435 117 aaKnown RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 ERVK-21P61565 698 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 DDX39BQ13838 428 aaKnown RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 BLOC1S3Q6QNY0 202 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 TRIM54Q9BYV2 358 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 SLC2A11Q9BYW1 496 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 INTS7Q9NVH2 962 aaKnown RBP17.56■□□□□ 0.4
CAPN1-201ENST00000279247 DPP7Q9UHL4 492 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 USP22Q9UPT9 525 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 PRKAB1Q9Y478 270 aa17.56■□□□□ 0.4
CAPN1-201ENST00000279247 VPS4BO75351 444 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 SEC22BO75396 215 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 ZNF30P17039 623 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 GSTA3Q16772 222 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 SLC22A15Q8IZD6 547 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 LILRA2Q8N149 483 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 RASGEF1AQ8N9B8 481 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PPWD1Q96BP3 646 aaKnown RBP17.55■□□□□ 0.4
CAPN1-201ENST00000279247 MED8Q96G25 268 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PFDN4Q9NQP4 134 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 AURKCQ9UQB9 309 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 C2orf16Q68DN1 1984 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 RSL1D1O76021 490 aaKnown RBP17.55■□□□□ 0.4
CAPN1-201ENST00000279247 ATP4BP51164 291 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 CCSMST1Q4G0I0 132 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PROKR1Q8TCW9 393 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 LRRC58Q96CX6 371 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 ASB9Q96DX5 294 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PPM1MQ96MI6 270 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PKP2Q99959 881 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PARVBQ9HBI1 364 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 TMCO1Q9UM00 188 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PSMD13Q9UNM6 376 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 KNL1Q8NG31 2342 aa17.55■□□□□ 0.4
CAPN1-201ENST00000279247 PRR23AA6NEV1 266 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 LSM1O15116 133 aaKnown RBP17.54■□□□□ 0.4
CAPN1-201ENST00000279247 LZTS3O60299 673 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-201ENST00000279247 NFATC1O95644 943 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 NCK1P16333 377 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 GCKP35557 465 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 ZNF234Q14588 700 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms