RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 AFMIDQ63HM1 303 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 DGLUCYQ7Z3D6 616 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 GDF7Q7Z4P5 450 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 MTERF4Q7Z6M4 381 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 AACSQ86V21 672 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 NUDT13Q86X67 352 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 FOXP4Q8IVH2 680 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 TIGD4Q8IY51 512 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 SCYL3Q8IZE3 742 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 BATF2Q8N1L9 274 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 GUF1Q8N442 669 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 SIRT6Q8N6T7 355 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ENDOVQ8N8Q3 282 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 STEAP2Q8NFT2 490 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 FBXO18Q8NFZ0 1043 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 TSPAN14Q8NG11 270 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 OCC1Q8TAD7 63 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 MIB2Q96AX9 1013 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ARL5BQ96KC2 179 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CATSPER2Q96P56 530 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 OR2A14Q96R47 310 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CCT7Q99832 543 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 SSX3Q99909 188 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 WDR83Q9BRX9 315 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ZNF747Q9BV97 191 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 LSG1Q9H089 658 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 R3HDMLQ9H3Y0 253 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 SERHL2Q9H4I8 314 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 C8orf33Q9H7E9 229 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 FAM118AQ9NWS6 357 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 SPG21Q9NZD8 308 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 STK39Q9UEW8 545 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 USP22Q9UPT9 525 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 R3HDM2Q9Y2K5 976 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 HS3ST3A1Q9Y663 406 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 DDX49Q9Y6V7 483 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 COMMD3-BMI1R4GMX3 469 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CEP350Q5VT06 3117 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PSME4Q14997 1843 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 A0A087WZY1 265 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 C15orf38-AP3S2A0A0A6YYH1 394 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 A0A1B0GVM2 712 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 C2orf92A0A1B0GVN3 265 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 GAGE12BA1L429 117 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 C5orf51A6NDU8 294 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 DDTLA6NHG4 134 aaPredicted RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 AGAP5A6NIR3 686 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 TMCO5BA8MYB1 307 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 BTBD19C9JJ37 291 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 KIAA0391O15091 583 aaKnown RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 CIDEAO60543 219 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 SEC31AO94979 1220 aaKnown RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 SLC16A8O95907 504 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CHEK2O96017 543 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 LMNAP02545 664 aaKnown RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 C8orf89P0DMQ9 161 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PRKACBP22694 351 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CHMLP26374 656 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PTPN6P29350 595 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PRKAR1BP31321 381 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 APOBEC3AP31941 199 aaPredicted RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 HNF1BP35680 557 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 FRKP42685 505 aaPredicted RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 GABRB2P47870 512 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PRMT2P55345 433 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 EIF3EP60228 445 aaKnown RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 NHLH2Q02577 135 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 TAP1Q03518 808 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 BNIP1Q12981 228 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 PDZK1IP1Q13113 114 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 NADK2Q4G0N4 442 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ZNF667Q5HYK9 610 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 LY6G5CQ5SRR4 150 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 OR6B2Q6IFH4 312 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ZNF529Q6P280 563 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CORO6Q6QEF8 472 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CFAP77Q6ZQR2 320 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 HTR3DQ70Z44 454 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 GPRIN1Q7Z2K8 1008 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ABI3BPQ7Z7G0 1075 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 EXOC3L1Q86VI1 746 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 ZNF573Q86YE8 665 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CCDC83Q8IWF9 413 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 CFAP206Q8IYR0 622 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 FAM9CQ8IZT9 166 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 KRT222Q8N1A0 295 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 LILRA3Q8N6C8 439 aaPredicted RBP4.52□□□□□ -1.69
CD44-202ENST00000278385 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
CD44-202ENST00000278385 UXS1Q8NBZ7 420 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms