RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PEX6Q13608 980 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF655Q8N720 491 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 RBM15BQ8NDT2 890 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 DENND1AQ8TEH3 1009 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 RERGQ96A58 199 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 LILRB3O75022 631 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 CD72P21854 359 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 MSX2P35548 267 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 RPS21P63220 83 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 GRIN2CQ14957 1233 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 PTCHD3Q3KNS1 767 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 VPS26BQ4G0F5 336 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 TBCELQ5QJ74 424 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 KBTBD6Q86V97 674 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 GPR26Q8NDV2 337 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 SLC32A1Q9H598 525 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 C8orf33Q9H7E9 229 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 CD248Q9HCU0 757 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 SPAG4Q9NPE6 437 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 IRAK3Q9Y616 596 aa14.2□□□□□ -0.14
PDLIM2-201ENST00000265810 ERAL1O75616 437 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF23P17027 643 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 AGTR2P50052 363 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PRKAG1P54619 331 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 MED21Q13503 144 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 GPNMBQ14956 572 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 TECRLQ5HYJ1 363 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF614Q8N883 585 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 OR52B2Q96RD2 323 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PPM1HQ9ULR3 514 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ENTPD4Q9Y227 616 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 SSR2P43308 183 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 GALK1P51570 392 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 GCNT7Q6ZNI0 430 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF438Q7Z4V0 828 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 LPGAT1Q92604 370 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PANX1Q96RD7 426 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 CCT7Q99832 543 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 KLHL3Q9UH77 587 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PSME2Q9UL46 239 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 CYP8B1Q9UNU6 501 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 HS3ST2Q9Y278 367 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ENTPD5O75356 428 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 AP2A2O94973 939 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 TNNI3P19429 210 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 HNMTP50135 292 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 ESRRGP62508 458 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 MRPS22P82650 360 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 LRRC32Q14392 662 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PAOXQ6QHF9 649 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PYDC1Q8WXC3 89 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 CPEB1Q9BZB8 566 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 PCDHGA11Q9Y5H2 935 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 FDXRP22570 491 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 SLC7A2P52569 658 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 NUSAP1Q9BXS6 441 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 DTNAQ9Y4J8 743 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 NUMBLQ9Y6R0 609 aa14.19□□□□□ -0.14
PDLIM2-201ENST00000265810 LIN7AO14910 233 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 KMOO15229 486 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 OR1F1O43749 312 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 C5AR1P21730 350 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 BLKP51451 505 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 HMGCS1Q01581 520 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 VAC14Q08AM6 782 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 SPIDRQ14159 915 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 SNAP47Q5SQN1 464 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 PHC3Q8NDX5 983 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 CYGBQ8WWM9 190 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 FAM3CQ92520 227 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ITM2CQ9NQX7 267 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 RIMKLBQ9ULI2 386 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 RNGTTO60942 597 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 GCAP28676 217 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 RGS1Q08116 209 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 DENND5AQ6IQ26 1287 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 KLHL35Q6PF15 583 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 BHLHE22Q8NFJ8 381 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 OR2A12Q8NGT7 310 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ANKRD49Q8WVL7 239 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 BTN2A2Q8WVV5 523 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 PLEKHG4BQ96PX9 1271 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 RTKNQ9BST9 563 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 FAIM2Q9BWQ8 316 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 SRMSQ9H3Y6 488 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 GOLGB1Q14789 3259 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 RFXANKO14593 260 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ATP6V1B2P21281 511 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF140P52738 457 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 NFKB2Q00653 900 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ZNF678Q5SXM1 525 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 LILRA6Q6PI73 481 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ULK2Q8IYT8 1036 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ST13P4Q8IZP2 240 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 ASB16Q96NS5 453 aa14.18□□□□□ -0.14
PDLIM2-201ENST00000265810 MIPEPQ99797 713 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms