RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ARFGAP1Q8N6T3 406 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 SLC32A1Q9H598 525 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 CCNYL3P0C7X3 344 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 AP1S2P56377 157 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 BEND5Q7L4P6 421 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 GALNT5Q7Z7M9 940 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 WDR36Q8NI36 951 aaKnown RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 MCMBPQ9BTE3 642 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 CCDC106Q9BWC9 280 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 STMN3Q9NZ72 180 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 MYH15Q9Y2K3 1946 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 STX16-NPEPL1H3BU86 382 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 STX16O14662 325 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 WNT9AO14904 365 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PFKMP08237 780 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GATMP50440 423 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF783Q6ZMS7 281 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 FAM43BQ6ZT52 329 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 TPRG1Q6ZUI0 275 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 TXNDC5Q8NBS9 432 aaKnown RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 KCNJ9Q92806 393 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 IGSF21Q96ID5 467 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PSKH2Q96QS6 385 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 HAS3O00219 553 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 OR10H2O60403 315 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 WASP42768 502 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GPR62Q9BZJ7 368 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 REXO4Q9GZR2 422 aaKnown RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PALMDQ9NP74 551 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GTF2A1LQ9UNN4 478 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GLI3P10071 1580 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 ZBTB42B2RXF5 422 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PI15O43692 258 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 FAM189A1O60320 539 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 OAZ2O95190 189 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GJA5P36382 358 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 MAPK12P53778 367 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 LSM3P62310 102 aaKnown RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 SIM2Q14190 667 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 FAM124AQ86V42 546 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 ZSCAN5AQ9BUG6 496 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 TAF1P21675 1872 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 COCHO43405 550 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 RFC2P35250 354 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 CAPGP40121 348 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 BLVRAP53004 296 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 USP39Q53GS9 565 aaKnown RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 C9orf64Q5T6V5 341 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PRR23BQ6ZRT6 265 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 GALNT13Q8IUC8 556 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 IGSF8Q969P0 613 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PCBD2Q9H0N5 130 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 IL36AQ9UHA7 158 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 CNOT6Q9ULM6 557 aaKnown RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 E7ENX8 843 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 CCDC92Q53HC0 331 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 ARSIQ5FYB1 569 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 PIK3R6Q5UE93 754 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 NPWQ8N729 165 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 CRNNQ9UBG3 495 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-201ENST00000264555 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 TSC22D4Q9Y3Q8 395 aa16.44■□□□□ 0.22
PHRF1-201ENST00000264555 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 FAM47E-STBD1D6RA91 191 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 ERN1O75460 977 aaKnown RBP16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SEC24AO95486 1093 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 FEN1P39748 380 aaKnown RBP16.43■□□□□ 0.22
PHRF1-201ENST00000264555 TEAD4Q15561 434 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 PM20D1Q6GTS8 502 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 OR10G6Q8NH81 332 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SLC29A3Q9BZD2 475 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 EXD2Q9NVH0 621 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 MAP4K5Q9Y4K4 846 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 COLEC10Q9Y6Z7 277 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 TNFRSF11BO00300 401 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 RGS21Q2M5E4 152 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 NAPRTQ6XQN6 538 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 AHI1Q8N157 1196 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 DNAJB9Q9UBS3 223 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SEC14L3Q9UDX4 400 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 ATP6V1HQ9UI12 483 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 LYVE1Q9Y5Y7 322 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 PRPS1L1P21108 318 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 PTPRCAPQ14761 206 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 TRAF7Q6Q0C0 670 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 TREML1Q86YW5 311 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SERHL2Q9H4I8 314 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SLC28A3Q9HAS3 691 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 SERHLQ9NQF3 203 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms