RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TBC1D17Q9HA65 648 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 SLC17A4Q9Y2C5 497 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 H3BM21 787 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 ANXA5P08758 320 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 CCR3P51677 355 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 AP1S2P56377 157 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 ABRQ12979 859 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 METTL2BQ6P1Q9 378 aaKnown RBP22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 MBOAT1Q6ZNC8 495 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 MTDHQ86UE4 582 aaKnown RBP22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 AMZ2Q86W34 360 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 AGAP11Q8TF27 550 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 MYOCQ99972 504 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 DPEP2Q9H4A9 486 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 SEMA4BQ9NPR2 832 aaPredicted RBP22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 ARL15Q9NXU5 204 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 WWOXQ9NZC7 414 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 CYP8B1Q9UNU6 501 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 TRAF6Q9Y4K3 522 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 ANKRD12Q6UB98 2062 aa22.38■■□□□ 1.17
SMARCB1-201ENST00000263121 HGSO14964 777 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 KMOO15229 486 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 MLYCDO95822 493 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 CEACAM5P06731 702 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 FGF4P08620 206 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 HNRNPA2B1P22626 353 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 HSPA7P48741 367 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 NFE2L1Q14494 772 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 FAM83HQ6ZRV2 1179 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 CCDC121Q6ZUS5 278 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 ALYREFQ86V81 257 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 MCOLN3Q8TDD5 553 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 CLDN23Q96B33 292 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 HGH1Q9BTY7 390 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 CD244Q9BZW8 370 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 MYLK2Q9H1R3 596 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 RMI1Q9H9A7 625 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 MID1IP1Q9NPA3 183 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 SLC23A2Q9UGH3 650 aa22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 APOBEC2Q9Y235 224 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-201ENST00000263121 POM121BA6NF01 834 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 ARHGEF33A8MVX0 844 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 CACNB4O00305 520 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 DIAPH2O60879 1101 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 FUCA1P04066 466 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 HIST1H2AGP0C0S8 130 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 HIST1H2ADP20671 130 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 OXTRP30559 389 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 GGT5P36269 586 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 KIAA1024LP59773 190 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 RPA4Q13156 261 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 GALNTL6Q49A17 601 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 SLC9B1Q4ZJI4 515 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 TCAIMQ8N3R3 496 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 AFAP1L2Q8N4X5 818 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 OR56A4Q8NGH8 313 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 ERP27Q96DN0 273 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 TOE1Q96GM8 510 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 HIST1H2AHQ96KK5 128 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 RILPQ96NA2 401 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 HIST1H2AJQ99878 128 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 H2AFJQ9BTM1 129 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 CHRDQ9H2X0 955 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 WSB2Q9NYS7 404 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 A0A1B0GTL3 188 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 KLHL33A6NCF5 533 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 FPGTO14772 594 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 JUNP05412 331 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 HNMTP50135 292 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 CCR5P51681 352 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 CLDN2P57739 230 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 TTC23LQ6PF05 361 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 GOLGA7Q7Z5G4 137 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 GBP7Q8N8V2 638 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 PJA1Q8NG27 643 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 SCARF2Q96GP6 870 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 FOPNLQ96NB1 174 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 ZNF382Q96SR6 550 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 NUF2Q9BZD4 464 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 OR52A5Q9H2C5 316 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 C6orf106Q9H6K1 298 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 TM7SF3Q9NS93 570 aa22.36■■□□□ 1.17
SMARCB1-201ENST00000263121 KIAA0754O94854 1291 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 UBOX5O94941 541 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 CATP04040 527 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 IGHV4-34P06331 123 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 GTF2H2Q13888 395 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 PDCD2Q16342 344 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 ZXDCQ2QGD7 858 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 UGT3A2Q3SY77 523 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 KIAA0895LQ68EN5 471 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 GTF2H2CQ6P1K8 395 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 CLYBLQ8N0X4 340 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 FBXO15Q8NCQ5 510 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 CFAP61Q8NHU2 1237 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 BMFQ96LC9 184 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 EBF2Q9HAK2 575 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 ZNHIT2Q9UHR6 403 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 ZFP69BQ9UJL9 534 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms