RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 NUAK1O60285 661 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 DNAJA2O60884 412 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ULK1O75385 1050 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 WDR47O94967 919 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 NPPAP01160 153 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 POU2F2P09086 479 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ADH5P11766 374 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 TIMP2P16035 220 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SYN1P17600 705 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC6A2P23975 617 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC7A1P30825 629 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 MAD2L1Q13257 205 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 GBX1Q14549 363 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ZNF805Q5CZA5 627 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 CYP2R1Q6VVX0 501 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ZFAND4Q86XD8 727 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 LILRA2Q8N149 483 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 OR2T34Q8NGX1 318 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 PROKR1Q8TCW9 393 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HCAR2Q8TDS4 363 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 WFIKKN2Q8TEU8 576 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ZNF707Q96C28 371 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 TIFAQ96CG3 184 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC45A3Q96JT2 553 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HBEGFQ99075 208 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC12A9Q9BXP2 914 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC32A1Q9H598 525 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 DKK3Q9UBP4 350 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 PDE10AQ9Y233 779 aa12.68□□□□□ -0.38
SPTLC1-201ENST00000262554 ASPDHA6ND91 283 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 IFRD1O00458 451 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 FFAR3O14843 346 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC16A5O15375 505 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 GPR42O15529 346 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 RNASEH2AO75792 299 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 AP2A2O94973 939 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 ADH1CP00326 375 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 CYP17A1P05093 508 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 CTSLP07711 333 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 UBTFL6P0CB48 400 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 GGT5P36269 586 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 CASP2P42575 452 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 ST8SIA6P61647 398 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 SP140Q13342 867 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 BOP1Q14137 746 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 TLR1Q15399 786 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 PDE12Q6L8Q7 609 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 CYP20A1Q6UW02 462 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 MBOAT1Q6ZNC8 495 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 DPPA4Q7L190 304 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 LRRC70Q7Z2Q7 622 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 TRAM1L1Q8N609 369 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 SCAMP4Q969E2 229 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 ZSCAN5AQ9BUG6 496 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC29A3Q9BZD2 475 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 Q9H521 79 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 NFKBIL1Q9UBC1 381 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 POLR3HQ9Y535 204 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 PCDHA9Q9Y5H5 950 aa12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 MKI67P46013 3256 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-201ENST00000262554 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 TXNDC9O14530 226 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 CLDN9O95484 217 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 FTH1P02794 183 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 LYNP07948 512 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 CISD3P0C7P0 127 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 G6PDP11413 515 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 SLC2A4P14672 509 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 CYP2A7P20853 494 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 IL12AP29459 219 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 ETV3P41162 512 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 GRIA3P42263 894 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 HSPA13P48723 471 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 HNMTP50135 292 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 CREB5Q02930 508 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 IMPG1Q17R60 797 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 PAGE3Q5JUK9 113 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 HABP4Q5JVS0 413 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 IRAK1BP1Q5VVH5 260 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 Q6ZVL8 140 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 NEK10Q6ZWH5 1172 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 ARPINQ7Z6K5 226 aa12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 APLFQ8IW19 511 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1-201ENST00000262554 KIAA1958Q8N8K9 716 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms