RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PTPN5P54829 565 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 MARC1Q5VT66 337 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 TCEAL6Q6IPX3 200 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 ANKRD54Q6NXT1 300 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 DGLUCYQ7Z3D6 616 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 CCDC71Q8IV32 467 aaPredicted RBP8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 SLC9A7Q96T83 725 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 IL1RAPQ9NPH3 570 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 SMOXQ9NWM0 555 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 HPF1Q9NWY4 346 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 RPS6KB2Q9UBS0 482 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 SRRDQ9UH36 339 aa8.21□□□□□ -1.1
SNCAIP-201ENST00000261367 A0A1W2PP18 115 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF487B1APH4 448 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TGFB1I1O43294 461 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MSI1O43347 362 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CCNDBP1O95273 360 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CHMP24386 653 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MAPK9P45984 424 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 RARRES1P49788 294 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 GPX6P59796 221 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SLC3A1Q07837 685 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 NDUFA9Q16795 377 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ATAD3CQ5T2N8 411 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 UBE2UQ5VVX9 321 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MEDAGQ5VYS4 303 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MAP1SQ66K74 1059 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CHST15Q7LFX5 561 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 OR8J3Q8NGG0 315 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MAFIPQ8WZ33 124 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SGTBQ96EQ0 304 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 C2orf49Q9BVC5 232 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 C3orf14Q9HBI5 128 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PCDHGB5Q9Y5G0 923 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ITGB1P05556 798 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ANXA5P08758 320 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 LINC00032P0C843 101 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CSH1P0DML2 217 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CSH2P0DML3 217 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 NOS2P35228 1153 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 GSK3BP49841 420 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TPMTP51580 245 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 RPL38P63173 70 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ZACNQ401N2 412 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 IFI44LQ53G44 452 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 LRRC66Q68CR7 880 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF782Q6ZMW2 699 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SNX20Q7Z614 316 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 WDSUB1Q8N9V3 476 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 C11orf65Q8NCR3 313 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 THRSPQ92748 146 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SCGB3A2Q96PL1 93 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 GAL3ST1Q99999 423 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SNRNP25Q9BV90 132 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 FNDC11Q9BVV2 318 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ATP13A3Q9H7F0 1226 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 UNKLQ9H9P5 680 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PCDHB3Q9Y5E6 796 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TEX264Q9Y6I9 313 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TCP10L2B9ZVM9 353 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 EIF3FO00303 357 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 DCLK1O15075 740 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 LYPLA2O95372 231 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SRPRAP08240 638 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 GPC1P35052 558 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 UGT2B10P36537 528 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 EIF2S3P41091 472 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TDGQ13569 410 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MPP2Q14168 576 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 KCNJ11Q14654 390 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 EIF4HQ15056 248 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CMC1Q7Z7K0 106 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 IFNLR1Q8IU57 520 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 RBFAQ8N0V3 343 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PIAS4Q8N2W9 510 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 KLHL36Q8N4N3 616 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TXNDC5Q8NBS9 432 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ANKRD49Q8WVL7 239 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 BIRC7Q96CA5 298 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 CEP295NLQ96MC4 621 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 PANX1Q96RD7 426 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TMEM209Q96SK2 561 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SPON2Q9BUD6 331 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 ZNF408Q9H9D4 720 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SIAEQ9HAT2 523 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 MGAT4AQ9UM21 535 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 FARP1Q9Y4F1 1045 aaPredicted RBP8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
SNCAIP-201ENST00000261367 SOCS7O14512 581 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms