RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EPCAMP16422 314 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 EPB42P16452 691 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 AOAHP28039 575 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 OXTRP30559 389 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 ARHGAP15Q53QZ3 475 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 ELMSAN1Q6PJG2 1045 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 SERPINA13PQ6UXR4 307 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 AQP12AQ8IXF9 295 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 NTMT1Q9BV86 223 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 ZNF490Q9ULM2 529 aaPredicted RBP21.24■□□□□ 0.99
CLN6-201ENST00000249806 ERVW-1Q9UQF0 538 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 DHRS12A0PJE2 317 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 KRT87PA6NCN2 255 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ULK1O75385 1050 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 LEFTY1O75610 366 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ANXA5P08758 320 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 CBSLP0DN79 551 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 CBSP35520 551 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 IRS1P35568 1242 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 BMPR1AP36894 532 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 GRIA2P42262 883 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 POLR2LP62875 67 aaKnown RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 PTGR1Q14914 329 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ZNF77Q15935 545 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ARSIQ5FYB1 569 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 TBCELQ5QJ74 424 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 HSD11B1LQ7Z5J1 315 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 NECAB2Q7Z6G3 386 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ST13P4Q8IZP2 240 aaPredicted RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 SPPL3Q8TCT6 385 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 UBTD2Q8WUN7 234 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ING5Q8WYH8 240 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 GBP5Q96PP8 586 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 KCTD14Q9BQ13 255 aaPredicted RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 TPST1O60507 370 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ATP1B2P14415 290 aaPredicted RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 DDX6P26196 483 aaKnown RBP eCLIP21.23■□□□□ 0.992e-8■■□□□ 11.6
CLN6-201ENST00000249806 AKT1P31749 480 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 RECQLP46063 649 aaPredicted RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 BOP1Q14137 746 aaKnown RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 POM121L1PQ3SYA9 428 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 DLEU7Q6UYE1 221 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 UBE2R2Q712K3 238 aaPredicted RBP21.23■□□□□ 0.99
CLN6-201ENST00000249806 PIDD1Q9HB75 910 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 ZFP14Q9HCL3 533 aa21.23■□□□□ 0.99
CLN6-201ENST00000249806 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 FAM149AA5PLN7 773 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 RGS14O43566 566 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 EBLN1P0CF75 366 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 EPORP19235 508 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 POLR2EP19388 210 aaKnown RBP21.22■□□□□ 0.99
CLN6-201ENST00000249806 SLC44A4Q53GD3 710 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 Q6ZVL8 140 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 GRASPQ7Z6J2 395 aaPredicted RBP21.22■□□□□ 0.99
CLN6-201ENST00000249806 RALGPS2Q86X27 583 aaPredicted RBP21.22■□□□□ 0.99
CLN6-201ENST00000249806 FRS2Q8WU20 508 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 ULK4Q96C45 1275 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 PPP3R2Q96LZ3 170 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 PPM1MQ96MI6 270 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 TRIM15Q9C019 465 aa21.22■□□□□ 0.99
CLN6-201ENST00000249806 WASH3PC4AMC7 463 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 INPP4BO15327 924 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 MSH3P20585 1137 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 PRKCQQ04759 706 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 CPSF6Q16630 551 aaKnown RBP eCLIP21.21■□□□□ 0.99
CLN6-201ENST00000249806 ERMP1Q7Z2K6 904 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 RGL4Q8IZJ4 473 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 BEND7Q8N7W2 519 aaPredicted RBP21.21■□□□□ 0.99
CLN6-201ENST00000249806 ZNF366Q8N895 744 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 BADQ92934 168 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 MRGPRX3Q96LB0 322 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 HEPHQ9BQS7 1158 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 PKD2L2Q9NZM6 624 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 AP1G1O43747 822 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 CTSLP07711 333 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 ETV3P41162 512 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 HSPA13P48723 471 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 INPP5AQ14642 412 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 ZNF648Q5T619 568 aaPredicted RBP21.21■□□□□ 0.99
CLN6-201ENST00000249806 ZDHHC20Q5W0Z9 365 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 HID1Q8IV36 788 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 DPP10Q8N608 796 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 PYCR2Q96C36 320 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 ZNF597Q96LX8 424 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 RAD9AQ99638 391 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 TMEM45AQ9NWC5 275 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 CROCCQ5TZA2 2017 aa21.21■□□□□ 0.99
CLN6-201ENST00000249806 MANBAO00462 879 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 TLL1O43897 1013 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PSMC3P17980 439 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PSMA4P25789 261 aaKnown RBP21.2■□□□□ 0.98
CLN6-201ENST00000249806 PEX19P40855 299 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SELPLGQ14242 412 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 CYP51A1Q16850 503 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 BRAT1Q6PJG6 821 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PTRH1Q86Y79 214 aaKnown RBP21.2■□□□□ 0.98
CLN6-201ENST00000249806 ADGRG5Q8IZF4 528 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PIP4K2CQ8TBX8 421 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 ASB11Q8WXH4 323 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SLC12A9Q9BXP2 914 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms