RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SOWAHCQ53LP3 525 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 XKR4Q5GH76 650 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ATXN7L2Q5T6C5 722 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GTF2H2CQ6P1K8 395 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 DLEU7Q6UYE1 221 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GOLGA7Q7Z5G4 137 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 FAM193BQ96PV7 902 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 EBPLQ9BY08 206 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CIPCQ9C0C6 399 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CSNK1G1Q9HCP0 422 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GNPTGQ9UJJ9 305 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF490Q9ULM2 529 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 SNX8Q9Y5X2 465 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 PSMD11O00231 422 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 NDST3O95803 873 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 HTR1EP28566 365 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF135P52742 658 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GSTM4Q03013 218 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 DMPKQ09013 629 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 TP53BP2Q13625 1128 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CYP27C1Q4G0S4 372 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 NIPAL1Q6NVV3 410 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZCCHC8Q6NZY4 707 aaKnown RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 LIMS2Q7Z4I7 341 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 VTCN1Q7Z7D3 282 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 MON1AQ86VX9 555 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZFAND4Q86XD8 727 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ALDH16A1Q8IZ83 802 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CLIP4Q8N3C7 705 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 OR52J3Q8NH60 311 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CAB39Q9Y376 341 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GMPPBQ9Y5P6 360 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 LCHNA4D1U4 455 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF99A8MXY4 864 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 UPK1AO00322 258 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CNOT3O75175 753 aaKnown RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ALOX12P18054 663 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 IGFBP5P24593 272 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 DNAJB1P25685 340 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF846Q147U1 533 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ADPRMQ3LIE5 342 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CTXN3Q4LDR2 81 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 CHPT1Q8WUD6 406 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ALPK1Q96QP1 1244 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 INPP5KQ9BT40 448 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 PARVBQ9HBI1 364 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ARNT2Q9HBZ2 717 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 EIF3LQ9Y262 564 aaKnown RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 MED16Q9Y2X0 877 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 ZFP37Q9Y6Q3 630 aaPredicted RBP16.57■□□□□ 0.24
SGPP1-201ENST00000247225 F5H5T6 163 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 M0R129 80 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 PRMT5O14744 637 aaPredicted RBP16.56■□□□□ 0.24
SGPP1-201ENST00000247225 SEC14L2O76054 403 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 PRAMEF12O95522 483 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 COL6A1P12109 1028 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 HLA-DPA1P20036 260 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 SERPINB1P30740 379 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 GP2P55259 537 aaKnown RBP16.56■□□□□ 0.24
SGPP1-201ENST00000247225 OXCT1P55809 520 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 DAB2P98082 770 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 EPS8Q12929 822 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 SETMARQ53H47 684 aaPredicted RBP16.56■□□□□ 0.24
SGPP1-201ENST00000247225 MANEALQ5VSG8 457 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 FAM171A1Q5VUB5 890 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 FAM171BQ6P995 826 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF621Q6ZSS3 439 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 TERB1Q8NA31 727 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 DPH2Q9BQC3 489 aaPredicted RBP16.56■□□□□ 0.24
SGPP1-201ENST00000247225 SIAEQ9HAT2 523 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 C3orf18Q9UK00 162 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 RAI2Q9Y5P3 530 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 B4GALT3O60512 393 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 VPS4BO75351 444 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 PRSS23O95084 383 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 OXSR1O95747 527 aaPredicted RBP16.56■□□□□ 0.24
SGPP1-201ENST00000247225 CPT1AP50416 773 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 DUSP4Q13115 394 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 SERINC3Q13530 473 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 LRRC73Q5JTD7 316 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 GPR153Q6NV75 609 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 UMODL1-AS1Q8N2C9 162 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 EGLN2Q96KS0 407 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 MAF1Q9H063 256 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 DNAJB9Q9UBS3 223 aa16.56■□□□□ 0.24
SGPP1-201ENST00000247225 PER2O15055 1255 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ULK1O75385 1050 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 SULT1C4O75897 302 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 MT-ND2P03891 347 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 NR4A2P43354 598 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 IDH2P48735 452 aaKnown RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 INAVAQ3KP66 663 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 CCDC103Q8IW40 242 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 NKAPQ8N5F7 415 aaKnown RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 BPIFB1Q8TDL5 484 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 MBOAT4Q96T53 435 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ASPSCR1Q9BZE9 553 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms