RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SPRED1Q7Z699 444 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 SATL1Q86VE3 508 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ZNF557Q8N988 423 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 OR8J3Q8NGG0 315 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TMEM74Q96NL1 305 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 CGREF1Q99674 301 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 C9orf16Q9BUW7 83 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 APOL5Q9BWW9 433 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TRIM8Q9BZR9 551 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ASAH2Q9NR71 780 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TSR3Q9UJK0 312 aaKnown RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 COMMD3-BMI1R4GMX3 469 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 A8MX80 341 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 DLGAP1O14490 977 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 INPP4BO15327 924 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 RSL1D1O76021 490 aaKnown RBP15.85■□□□□ 0.13
UBE3D-201ENST00000237186 PGM3O95394 542 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 ANXA5P08758 320 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 OR56A5P0C7T3 313 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 GNPDA1P46926 289 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 EPHA5P54756 1037 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 ROR2Q01974 943 aaKnown RBP15.85■□□□□ 0.13
UBE3D-201ENST00000237186 ATP6AP1Q15904 470 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 DPY19L3Q6ZPD9 716 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 PRPF18Q99633 342 aaKnown RBP15.85■□□□□ 0.13
UBE3D-201ENST00000237186 CORO1BQ9BR76 489 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 SLC12A9Q9BXP2 914 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 RPF2Q9H7B2 306 aaKnown RBP15.85■□□□□ 0.13
UBE3D-201ENST00000237186 BRD9Q9H8M2 597 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 SLC25A13Q9UJS0 675 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 ANAPC2Q9UJX6 822 aa15.85■□□□□ 0.13
UBE3D-201ENST00000237186 TRIM43BA6NCK2 446 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 LOC730098B7Z3J9 87 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 ACOX3O15254 700 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 NUAK1O60285 661 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SLC2A4P14672 509 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 PCSK2P16519 638 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 HRH2P25021 359 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 DDX6P26196 483 aaKnown RBP eCLIP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 AOAHP28039 575 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CCR7P32248 378 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SPINT3P49223 89 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 POLE2P56282 527 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 POLR2LP62875 67 aaKnown RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 DMC1Q14565 340 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 ASTLQ6HA08 431 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 IFNEQ86WN2 208 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 TMEM25Q86YD3 366 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 EPHX4Q8IUS5 362 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 TCAIMQ8N3R3 496 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CBR4Q8N4T8 237 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 AADATQ8N5Z0 425 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 TRIM43Q96BQ3 446 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 HBEGFQ99075 208 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 EMILIN2Q9BXX0 1053 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SLC24A3Q9HC58 644 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 PNPLA3Q9NST1 481 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 MAGEL2Q9UJ55 1249 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 POLR3HQ9Y535 204 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 IRAK3Q9Y616 596 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 OBSL1O75147 1896 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 ARHGAP10A1A4S6 786 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SOBPA7XYQ1 873 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 MANBAO00462 879 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 H6PDO95479 791 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CLDN9O95484 217 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 C1SP09871 688 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 MTHFD1P11586 935 aaKnown RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CCR2P41597 374 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CASP2P42575 452 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 RPIAP49247 311 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 NR1H2P55055 460 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 GGTA1PQ4G0N0 100 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 TMTC4Q5T4D3 741 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 THEMIS2Q5TEJ8 643 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 BORAQ6PGQ7 559 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 RTL10Q7L3V2 364 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 PIAS4Q8N2W9 510 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 BIRC7Q96CA5 298 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SMG9Q9H0W8 520 aaKnown RBP15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SLC32A1Q9H598 525 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 OLAHQ9NV23 265 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 SMOXQ9NWM0 555 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 ZNF639Q9UID6 485 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 PDE10AQ9Y233 779 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 CCL26Q9Y258 94 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 NEUROG3Q9Y4Z2 214 aa15.84■□□□□ 0.13
UBE3D-201ENST00000237186 ZNF106Q9H2Y7 1883 aaKnown RBP15.83■□□□□ 0.13
UBE3D-201ENST00000237186 H3BNH8 94 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 SLC16A5O15375 505 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 RASAL1O95294 804 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 FGF19O95750 216 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 IL6P05231 212 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 C8GP07360 202 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 MPC1LP0DKB6 136 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 PABPC1P11940 636 aaKnown RBP15.83■□□□□ 0.12
UBE3D-201ENST00000237186 EPORP19235 508 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 HNMTP50135 292 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 OR4D2P58180 307 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms