RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CYGBQ8WWM9 190 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 C17orf80Q9BSJ5 609 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 UGT2B28Q9BY64 529 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ZNF334Q9HCZ1 680 aaPredicted RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 MRPL17Q9NRX2 175 aaKnown RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 CREBZFQ9NS37 354 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 PQBP1O60828 265 aaKnown RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 EPB42P16452 691 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 NELFEP18615 380 aaKnown RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 NSG1P42857 185 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 RPL38P63173 70 aaKnown RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 HABP4Q5JVS0 413 aaKnown RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 SPOUT1Q5T280 376 aaKnown RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 LPCAT2Q7L5N7 544 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 RALGPS2Q86X27 583 aaPredicted RBP21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 DTWD1Q8N5C7 304 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 FIBINQ8TAL6 211 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 ITFG1Q8TB96 612 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 RNF145Q96MT1 663 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 DPY30Q9C005 99 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 ZDHHC3Q9NYG2 299 aa21.56■■□□□ 1.04
SMARCD2-201ENST00000225742 MANBAO00462 879 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 GNAO1P09471 354 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 TTKP33981 857 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CA5AP35218 305 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 ADARB1P78563 741 aaKnown RBP21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CHRNB3Q05901 458 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 PHKG1Q16816 387 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CYBRD1Q53TN4 286 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 GPR141Q7Z602 305 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 GPR65Q8IYL9 337 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 FAM9CQ8IZT9 166 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 TCAIMQ8N3R3 496 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 USP7Q93009 1102 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CCDC97Q96F63 343 aaPredicted RBP21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 ZNF583Q96ND8 569 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 SEPHS2Q99611 448 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 APOL5Q9BWW9 433 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 LRTM1Q9HBL6 345 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 ATXN10Q9UBB4 475 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 PPIL1Q9Y3C6 166 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 STK16O75716 305 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 UGT1A1P22309 533 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 UGT1A4P22310 534 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 UGT1A3P35503 534 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 UGT1A5P35504 534 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 DGKQP52824 942 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CCL23P55773 120 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 SLC7A9P82251 487 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 LMAN2Q12907 356 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 SELPLGQ14242 412 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 ZDHHC20Q5W0Z9 365 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 TXNDC8Q6A555 127 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 TPRG1Q6ZUI0 275 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 DDX53Q86TM3 631 aaKnown RBP21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CLDN19Q8N6F1 224 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 OR2AP1Q8NGE2 309 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 OR6K2Q8NGY2 324 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 VPS50Q96JG6 964 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 CAPNS2Q96L46 248 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 PKD2L2Q9NZM6 624 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 TSR3Q9UJK0 312 aaKnown RBP21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 USP22Q9UPT9 525 aa21.55■■□□□ 1.04
SMARCD2-201ENST00000225742 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 RSL1D1O76021 490 aaKnown RBP21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 HPRP00739 348 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 KRT6AP02538 564 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 KRT6BP04259 564 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 ANXA5P08758 320 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 KRT6CP48668 564 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 MTPNP58546 118 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 SNRPD1P62314 119 aaKnown RBP21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 MAPKAPK3Q16644 382 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 IMPG1Q17R60 797 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 CNKSR3Q6P9H4 555 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 PNPT1Q8TCS8 783 aaKnown RBP21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 GTF2H4Q92759 462 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 ULK4Q96C45 1275 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 RDH12Q96NR8 316 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 OSBPL6Q9BZF3 934 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 CLMPQ9H6B4 373 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 KLQ9UEF7 1012 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 ZNF490Q9ULM2 529 aaPredicted RBP21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 SH3BP1Q9Y3L3 701 aa21.54■■□□□ 1.04
SMARCD2-201ENST00000225742 SCELO95171 688 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 SPATA31D3P0C874 917 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 GGT5P36269 586 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 ZXDBP98169 803 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 CYP4F3Q08477 520 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 PLEKHG6Q3KR16 790 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 SPATA31D4Q6ZUB0 917 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 DEFB128Q7Z7B8 93 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 TERB1Q8NA31 727 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 OR2T12Q8NG77 320 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 MAGEE2Q8TD90 523 aaPredicted RBP21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 MRPS31Q92665 395 aaKnown RBP21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 TMIGD2Q96BF3 282 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 C1orf109Q9NX04 203 aa21.53■■□□□ 1.04
SMARCD2-201ENST00000225742 NEUROG3Q9Y4Z2 214 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms