RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CENPFP49454 3210 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CXCR6O00574 342 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 TAPBPO15533 448 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CLPXO76031 633 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 IL1RNP18510 177 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 NRIP1P48552 1158 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ARF5P84085 180 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 SPIDRQ14159 915 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 PTGR1Q14914 329 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 NKG7Q16617 165 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 RNF219Q5W0B1 726 aaPredicted RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 CST9Q5W186 159 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 C16orf87Q6PH81 154 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ZNF783Q6ZMS7 281 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ADHFE1Q8IWW8 467 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 BPIFB6Q8NFQ5 453 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 UBTD2Q8WUN7 234 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 SNRNP27Q8WVK2 155 aaKnown RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 BEGAINQ9BUH8 593 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 FAM126AQ9BYI3 521 aaPredicted RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 DPY30Q9C005 99 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CIPCQ9C0C6 399 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 AMBRA1Q9C0C7 1298 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 B3GNT3Q9Y2A9 372 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 GNGT2O14610 69 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 FZD6O60353 706 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ZBTB11O95625 1053 aaPredicted RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 CD160O95971 181 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 KLKB1P03952 638 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 PGRP06401 933 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 GNPDA1P46926 289 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 HSPA7P48741 367 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 SGSHP51688 502 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 PLA2G16P53816 162 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 TPD52P55327 224 aaPredicted RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 TWF1Q12792 350 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 IL18R1Q13478 541 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 PTPRRQ15256 657 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 INO80DQ53TQ3 878 aaPredicted RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 RUNDC3AQ59EK9 446 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 CXorf57Q6NSI4 855 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 MSRB3Q8IXL7 192 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 MICU2Q8IYU8 434 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 NUDT8Q8WV74 236 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 FAM162AQ96A26 154 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 C19orf43Q9BQ61 176 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 GPR63Q9BZJ6 419 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 DCAF13Q9NV06 445 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 ELOVL2Q9NXB9 296 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 SLC25A37Q9NYZ2 338 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 C3orf18Q9UK00 162 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ANGPTL3Q9Y5C1 460 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 GPR39O43194 453 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ULK1O75385 1050 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 IL7RP16871 459 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 DGKAP23743 735 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 CORO1AP31146 461 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 PLIN5Q00G26 463 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ELAVL2Q12926 359 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 ZC3H12BQ5HYM0 836 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 ADGRF1Q5T601 910 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 DCDC5Q6ZRR9 648 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ABI1Q8IZP0 508 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 EID3Q8N140 333 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 ZCCHC7Q8N3Z6 543 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 OR5K1Q8NHB7 308 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 IKZF5Q9H5V7 419 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 LHX3Q9UBR4 397 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 INVSQ9Y283 1065 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 TDRKHQ9Y2W6 561 aaKnown RBP13.05□□□□□ -0.32
SRP54-201ENST00000216774 SH3GLB1Q9Y371 365 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
SRP54-201ENST00000216774 TRBV5-3A0A0A0MS03 114 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ZSCAN9O15535 394 aaPredicted RBP13.04□□□□□ -0.32
SRP54-201ENST00000216774 COCHO43405 550 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 STC2O76061 302 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 PRKD3O94806 890 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 GJB5O95377 273 aa13.04□□□□□ -0.32
SRP54-201ENST00000216774 ALDH2P05091 517 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms