RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 S100BP04271 92 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 SLC2A4P14672 509 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ZNF7P17097 686 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 CLCN4P51793 760 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 IST1P53990 364 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 PTGR1Q14914 329 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 AP5B1Q2VPB7 878 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ABRAXAS1Q6UWZ7 409 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ZC3H7AQ8IWR0 971 aaKnown RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTNS-201ENST00000046640 VWCEQ96DN2 955 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 MAGEE1Q9HCI5 957 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ACTR3BQ9P1U1 418 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 KLK8O60259 260 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TRBC1P01850 177 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 CXCL10P02778 98 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 MAP4P27816 1152 aaKnown RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 HMOX2P30519 316 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 RPS9P46781 194 aaKnown RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 ARHGEF7Q14155 803 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ATP6AP1Q15904 470 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 XKR7Q5GH72 579 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 NANOGP8Q6NSW7 305 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 SLC39A5Q6ZMH5 540 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 DCAF4L2Q8NA75 395 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 GPR26Q8NDV2 337 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TMEM125Q96AQ2 219 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TRMT2BQ96GJ1 504 aaKnown RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 NANOGQ9H9S0 305 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TANC1Q9C0D5 1861 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 AQP12BA6NM10 295 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TAPBPO15533 448 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 MATN4O95460 622 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ZBTB11O95625 1053 aaPredicted RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 MATN1P21941 496 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 VEGFBP49765 207 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 OR4D2P58180 307 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ERVK-8P63133 956 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
CTNS-201ENST00000046640 RAB33AQ14088 237 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 RCAN2Q14206 197 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 SELPLGQ14242 412 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ANKRD34AQ69YU3 496 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 HACD2Q6Y1H2 254 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 AQP12AQ8IXF9 295 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 CORO1BQ9BR76 489 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ING2Q9H160 280 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 FANCEQ9HB96 536 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 HCFC1R1Q9NWW0 138 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
CTNS-201ENST00000046640 H7C0S8 307 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 TGM5O43548 720 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 CSF2RAP15509 400 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ITGALP20701 1170 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ITGB8P26012 769 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 CYBRD1Q53TN4 286 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 INTS11Q5TA45 600 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 SPATA19Q7Z5L4 167 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 CLEC4FQ8N1N0 589 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 PARP8Q8N3A8 854 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 SMYD1Q8NB12 490 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 CHID1Q9BWS9 393 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ZDHHC6Q9H6R6 413 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 EXD2Q9NVH0 621 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 RIC8BQ9NVN3 520 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 IFT80Q9P2H3 777 aaPredicted RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 SLCO3A1Q9UIG8 710 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 SH3PXD2BA1X283 911 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 MAN1A2O60476 641 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ZNF821O75541 412 aaPredicted RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 RASAL1O95294 804 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 LDLRP01130 860 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms