RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 GYS2P54840 703 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PFKPQ01813 784 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SP2Q02086 613 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GAD2Q05329 585 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MALLQ13021 153 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MAPK7Q13164 816 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF773Q6PK81 442 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GPRIN3Q6ZVF9 776 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ACOT1Q86TX2 421 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SLC51BQ86UW2 128 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SLC22A17Q8WUG5 538 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SLC22A18Q96BI1 424 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SAT2Q96F10 170 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NODALQ96S42 347 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM47Q9BQJ4 181 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ISCUQ9H1K1 167 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 DUSP22Q9NRW4 184 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SLC39A1Q9NY26 324 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GTF3C4Q9UKN8 822 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MTF2Q9Y483 593 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PHF3Q92576 2039 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 USP17L7P0C7H9 530 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CHRNB1P11230 501 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CD97P48960 835 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RNF4P78317 190 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CDK3Q00526 305 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SSX2Q16385 188 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RALGPS1Q5JS13 557 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 DET1Q7L5Y6 550 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 OR10H4Q8NGA5 316 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GAL3ST4Q96RP7 486 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PBDC1Q9BVG4 233 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 DICER1Q9UPY3 1922 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 A0A0G2JN53 185 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MRASO14807 208 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 KCNK5O95279 499 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CHRM1P11229 460 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PSKH1P11801 424 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RORAP35398 523 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 P2RX1P51575 399 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CDH15P55291 814 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ANTXR2P58335 489 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PAOXQ6QHF9 649 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TFAP2DQ7Z6R9 452 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TRAPPC6BQ86SZ2 158 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RDH10Q8IZV5 341 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 OR6K6Q8NGW6 343 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PIGBQ92521 554 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MAP4K1Q92918 833 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PTGES2Q9H7Z7 377 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 QRICH2Q9H0J4 1663 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CHD5Q8TDI0 1954 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 REREQ9P2R6 1566 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NPIPA7E9PJI5 369 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NPIPA8P0DM63 369 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 BCKDHAP12694 445 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NT5EP21589 574 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 COMTP21964 271 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TUBA1BP68363 451 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 DHCR24Q15392 516 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PTGISQ16647 500 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 STXBP5Q5T5C0 1151 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TUBA1AQ71U36 451 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 STRADAQ7RTN6 431 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GPR156Q8NFN8 814 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TRMT10AQ8TBZ6 339 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CHPT1Q8WUD6 406 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PLEKHG4BQ96PX9 1271 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 REEP2Q9BRK0 252 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NDC1Q9BTX1 674 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 IMP3Q9NV31 184 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RLIMQ9NVW2 624 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SRRDQ9UH36 339 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HAO1Q9UJM8 370 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 DKKL1Q9UK85 242 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HEMK1Q9Y5R4 338 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PQ45 241 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PQY0 241 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CENPBD1B2RD01 187 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AP5Z1O43299 807 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GRID2O43424 1007 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CCNKO75909 580 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SNRPB2P08579 225 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AHCYP23526 432 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 COILP38432 576 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SEMA5AQ13591 1074 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HEPACAMQ14CZ8 416 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TOR1AIP1Q5JTV8 583 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 COLGALT1Q8NBJ5 622 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 FGGYQ96C11 551 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 RAB11FIP5Q9BXF6 653 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PXMP2Q9NR77 195 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SMCO4Q9NRQ5 59 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CREBZFQ9NS37 354 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HAO2Q9NYQ3 351 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TP53TG5Q9Y2B4 290 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AK6Q9Y3D8 172 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PALLDQ8WX93 1383 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TCOF1Q13428 1488 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms