RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HMOX2P30519 316 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 RPIAP49247 311 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 FLOT2Q14254 428 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 MUM1Q2TAK8 710 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 BLOC1S3Q6QNY0 202 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 UBE2R2Q712K3 238 aaPredicted RBP21.64■■□□□ 1.05
PNKP-220ENST00000627232 GPR149Q86SP6 731 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 ZNF366Q8N895 744 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 PYDC1Q8WXC3 89 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 ZFYVE19Q96K21 471 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 ZNF570Q96NI8 536 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 CDK15Q96Q40 435 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 PARVBQ9HBI1 364 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 SPAG4Q9NPE6 437 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 ZIM2Q9NZV7 527 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 SUCOQ9UBS9 1254 aaKnown RBP21.64■■□□□ 1.05
PNKP-220ENST00000627232 TRPS1Q9UHF7 1281 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 PDE10AQ9Y233 779 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 DENND4AQ7Z401 1863 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 COL4A3Q01955 1670 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 FADS2P1A8MWK0 482 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 NR5A2O00482 541 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 KPNA3O00505 521 aaPredicted RBP21.63■■□□□ 1.05
PNKP-220ENST00000627232 MAP3K7O43318 606 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 SGTAO43765 313 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 STK16O75716 305 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 BAG2O95816 211 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 EBLN1P0CF75 366 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 ARL1P40616 181 aaPredicted RBP21.63■■□□□ 1.05
PNKP-220ENST00000627232 SMU1Q2TAY7 513 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 ATP6AP1LQ52LC2 224 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 C6orf136Q5SQH8 315 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 C9orf64Q5T6V5 341 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 PRMT9Q6P2P2 845 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 IL27RAQ6UWB1 636 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 Q6ZSR9 355 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 GET4Q7L5D6 327 aaPredicted RBP21.63■■□□□ 1.05
PNKP-220ENST00000627232 DET1Q7L5Y6 550 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 DHDDSQ86SQ9 333 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 ASB11Q8WXH4 323 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 NAF1Q96HR8 494 aaKnown RBP21.63■■□□□ 1.05
PNKP-220ENST00000627232 ADA2Q9NZK5 511 aa21.63■■□□□ 1.05
PNKP-220ENST00000627232 E7ENX8 843 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 GFYI3L273 518 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 WNT9AO14904 365 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ANGPT2O15123 496 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 KATNA1O75449 491 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ACADSP16219 412 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 EPB42P16452 691 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ATP6V1C1P21283 382 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 FCARP24071 287 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ERFP50548 548 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 DIO3P55073 304 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ELP6Q0PNE2 266 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 HSPA14Q0VDF9 509 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ACOX1Q15067 660 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ZFP1Q6P2D0 407 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 SCIMPQ6UWF3 145 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 LRRC70Q7Z2Q7 622 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 CYP2U1Q7Z449 544 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 RASGRP3Q8IV61 690 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 SNX31Q8N9S9 440 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 GLYATL1Q969I3 302 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 COQ10AQ96MF6 247 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 HOPXQ9BPY8 73 aaPredicted RBP21.62■■□□□ 1.05
PNKP-220ENST00000627232 SLC32A1Q9H598 525 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 HPS4Q9NQG7 708 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 HEBP1Q9NRV9 189 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 ARL15Q9NXU5 204 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 TMEM181Q9P2C4 612 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 MBD1Q9UIS9 605 aaPredicted RBP21.62■■□□□ 1.05
PNKP-220ENST00000627232 PACSIN3Q9UKS6 424 aa21.62■■□□□ 1.05
PNKP-220ENST00000627232 OTOL1A6NHN0 477 aaPredicted RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 SYNCRIPO60506 623 aaKnown RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 HIST1H2AGP0C0S8 130 aaPredicted RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 HIST1H2ADP20671 130 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 CAPN3P20807 821 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 CYP2A7P20853 494 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 PBX2P40425 430 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 HNMTP50135 292 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 HTR6P50406 440 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 GTF2A1P52655 376 aaPredicted RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 AP1S2P56377 157 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 EMX2Q04743 252 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 MESP2Q0VG99 397 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 TRAP1Q12931 704 aaKnown RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 ELAVL3Q14576 367 aaKnown RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 SAMD4BQ5PRF9 694 aaKnown RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 SFRP1Q8N474 314 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 CPA6Q8N4T0 437 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 PIP4K2CQ8TBX8 421 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 UCMAQ8WVF2 138 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 ASZ1Q8WWH4 475 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 AP2M1Q96CW1 435 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 ASB9Q96DX5 294 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 HIST1H2AHQ96KK5 128 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 HIST1H2AJQ99878 128 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 H2AFJQ9BTM1 129 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 SLC29A3Q9BZD2 475 aa21.61■■□□□ 1.05
PNKP-220ENST00000627232 SLC52A3Q9NQ40 469 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms