RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 A6NCN8 305 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 KMOO15229 486 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 BUD23O43709 281 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 KCNJ13O60928 360 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 CDK14O94921 469 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 SLC4A1P02730 911 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 ERVK-10P10266 1014 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 F3P13726 295 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 SLC5A2P31639 672 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 ARCN1P48444 511 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 ARSDP51689 593 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 ZNF140P52738 457 aaPredicted RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 LIMK2P53671 638 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 HHEXQ03014 270 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 ACVR1Q04771 509 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 MGAT5Q09328 741 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 SOWAHCQ53LP3 525 aaPredicted RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 TMEM164Q5U3C3 297 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 AGBL2Q5U5Z8 902 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 KIAA0930Q6ICG6 404 aaPredicted RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 TMEM71Q6P5X7 295 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 ZNF574Q6ZN55 896 aaPredicted RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 CYS1Q717R9 158 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 LRRTM4Q86VH4 590 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 TDRPQ86YL5 185 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 OR13C4Q8NGS5 318 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 OR13J1Q8NGT2 312 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 OR10G6Q8NH81 332 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 SNRNP27Q8WVK2 155 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 CYTH2Q99418 400 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 NUDT22Q9BRQ3 303 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 TIMM29Q9BSF4 260 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 EPB41L1Q9H4G0 881 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 IL26Q9NPH9 171 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 MED4Q9NPJ6 270 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 IL17CQ9P0M4 197 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PDP2Q9P2J9 529 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PISDQ9UG56 409 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 FETUBQ9UGM5 382 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PKP3Q9Y446 797 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PCYT1BQ9Y5K3 369 aaPredicted RBP12.42□□□□□ -0.42
PNKP-217ENST00000625216 TRBV23OR9-2A0A075B6M9 112 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 IGHV5-10-1A0A0J9YXX1 117 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 C2orf81A6NN90 581 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 TK2O00142 265 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 CCL22O00626 93 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 CDH16O75309 829 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 FAM155BO75949 473 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 EML2O95834 649 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 ZNF7P17097 686 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 CD82P27701 267 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 SPAM1P38567 509 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 EPHA4P54764 986 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 CXADRP78310 365 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 TMEM115Q12893 351 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 TMED2Q15363 201 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 TAF1AQ15573 450 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 ATP13A5Q4VNC0 1218 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 TNFAIP8L3Q5GJ75 292 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 GLT6D1Q7Z4J2 308 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 CTAGE3PQ8IX95 158 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 TLCD1Q96CP7 247 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 PGM2Q96G03 612 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 C19orf43Q9BQ61 176 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 ZCCHC2Q9C0B9 1178 aaKnown RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 UCK1Q9HA47 277 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 BPIFA1Q9NP55 256 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 KLC4Q9NSK0 619 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 C20orf96Q9NUD7 363 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 PSMC3IPQ9P2W1 217 aaPredicted RBP12.41□□□□□ -0.42
PNKP-217ENST00000625216 RIMKLBQ9ULI2 386 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 PTPRQQ9UMZ3 2332 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 PSAT1Q9Y617 370 aa12.41□□□□□ -0.42
PNKP-217ENST00000625216 COL27A1Q8IZC6 1860 aaPredicted RBP12.4□□□□□ -0.42
PNKP-217ENST00000625216 UNC13CQ8NB66 2214 aa12.4□□□□□ -0.42
PNKP-217ENST00000625216 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
PNKP-217ENST00000625216 GOLGA6L10A6NI86 522 aa12.4□□□□□ -0.42
PNKP-217ENST00000625216 EIF4E1BA6NMX2 242 aaKnown RBP12.4□□□□□ -0.42
PNKP-217ENST00000625216 FOXO6A8MYZ6 492 aa12.4□□□□□ -0.42
PNKP-217ENST00000625216 GOLGA8KD6RF30 607 aa12.4□□□□□ -0.42
PNKP-217ENST00000625216 GOLGA8TH3BQL2 631 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms