RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RGS14O43566 566 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TPST1O60507 370 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 H6PDO95479 791 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 NCK1P16333 377 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 JAK1P23458 1154 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CCT8P50990 548 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PTPN5P54829 565 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 NR1H2P55055 460 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PLOD1Q02809 727 aaPredicted RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CRY1Q16526 586 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 FXNQ16595 210 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PHKG1Q16816 387 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TTLL9Q3SXZ7 439 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 METTL2BQ6P1Q9 378 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 RBM44Q6ZP01 1051 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 GAREM2Q75VX8 874 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZSWIM9Q86XI8 627 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PROSER1Q86XN7 944 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CMTR2Q8IYT2 770 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PAPD5Q8NDF8 572 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 DIS3LQ8TF46 1054 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 UBTD2Q8WUN7 234 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TFAP2CQ92754 450 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ISG20Q96AZ6 181 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 VWCEQ96DN2 955 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 LYSMD1Q96S90 227 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 HAUS8Q9BT25 410 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ACTL8Q9H568 366 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 RC3H2Q9HBD1 1191 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 RDH14Q9HBH5 336 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 C8orf4Q9NR00 106 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANAPC2Q9UJX6 822 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 POLR3HQ9Y535 204 aaPredicted RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 KIAA1671Q9BY89 1806 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANKRD12Q6UB98 2062 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRAV19A0A0A6YYK7 116 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CARNS1A5YM72 827 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 NPIPB15A6NHN6 443 aaPredicted RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 AGAP14A8MT82 685 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 K7EPI3 171 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 VILLO15195 856 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ETS2P15036 469 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 NSG1P42857 185 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SNRPD1P62314 119 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ATP6AP1Q15904 470 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SMU1Q2TAY7 513 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RFTN2Q52LD8 501 aaPredicted RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 DLEU7Q6UYE1 221 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RNF165Q6ZSG1 346 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TSPAN33Q86UF1 283 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 EPHX4Q8IUS5 362 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TBC1D21Q8IYX1 336 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPR26Q8NDV2 337 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TSPAN14Q8NG11 270 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RHBDF1Q96CC6 855 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 LATS2Q9NRM7 1088 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 INTS6Q9UL03 887 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 EIF3LQ9Y262 564 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 MYRFQ9Y2G1 1151 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CCL27Q9Y4X3 112 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RNF103-CHMP3A0A140T963 221 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CXorf51AA0A1B0GTR3 108 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ABHD14A-ACY1A0A1B0GW23 586 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 H3BNH8 94 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 PDLIM1O00151 329 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC28A1O00337 649 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 LILRB3O75022 631 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 WDR47O94967 919 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 LRG1P02750 347 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CBSLP0DN79 551 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 C7P10643 843 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SRCP12931 536 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC2A4P14672 509 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 HRH2P25021 359 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 VARSP26640 1264 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RFC2P35250 354 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CBSP35520 551 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 GDF5P43026 501 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RPL38P63173 70 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 DEFB103AP81534 67 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CREMQ03060 361 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 MAD2L1Q13257 205 aaPredicted RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 LSAMPQ13449 338 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 PWP1Q13610 501 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 MYLK3Q32MK0 819 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TMTC4Q5T4D3 741 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 CRTC1Q6UUV9 634 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TPRG1Q6ZUI0 275 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SPRED1Q7Z699 444 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TMC8Q8IU68 726 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 HOMEZQ8IX15 550 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 HS6ST3Q8IZP7 471 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 BIRC7Q96CA5 298 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 NMD3Q96D46 503 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ASIC4Q96FT7 647 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SCRN2Q96FV2 425 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms