RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MTM1Q13496 603 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TIGD6Q17RP2 521 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TATDN1Q6P1N9 297 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KCNT2Q6UVM3 1135 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GALNT7Q86SF2 657 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ELMOD2Q8IZ81 293 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GHDCQ8N2G8 530 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ING5Q8WYH8 240 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KCNN1Q92952 543 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ARL5BQ96KC2 179 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF700Q9H0M5 742 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 IKZF2Q9UKS7 526 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 NDRG2Q9UN36 371 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CASTOR2A6NHX0 329 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZSCAN5BA6NJL1 495 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DLGAP1O14490 977 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ALOX15BO15296 676 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 MT-CO1P00395 513 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KDELR1P24390 212 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KIR3DL1P43629 444 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TLE3Q04726 772 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 MERTKQ12866 999 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DSG2Q14126 1118 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GTF2IRD2BQ6EKJ0 949 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 C3orf67Q6ZVT6 689 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GTF2IRD2Q86UP8 949 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GSTCDQ8NEC7 633 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 AP2M1Q96CW1 435 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC30A2Q9BRI3 323 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 MMP27Q9H306 513 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PLLPQ9Y342 182 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GPR75-ASB3A0A0A6YYF3 556 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ABHD14A-ACY1A0A1B0GW23 586 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SIGLEC16A6NMB1 481 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GPR25O00155 361 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TSPAN1O60635 241 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TGM6O95932 706 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ICAM1P05362 532 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GKN3PP0CG01 181 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ADH6P28332 368 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 HTR7P34969 479 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 C1orf186Q6ZWK4 172 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CIR1Q86X95 450 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KAT2BQ92831 832 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 HIST1H2AAQ96QV6 131 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SPATA9Q9BWV2 254 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC29A3Q9BZD2 475 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF334Q9HCZ1 680 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 MRPS23Q9Y3D9 190 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PCDHB1Q9Y5F3 818 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC15A5A6NIM6 579 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SULT1C2O00338 296 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 LIASO43766 372 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DFNA5O60443 496 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PRAMEF12O95522 483 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PGAM2P15259 253 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TFEBP19484 476 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC7A1P30825 629 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DLSTP36957 453 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GNPDA1P46926 289 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TKTL1P51854 596 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KLF10Q13118 480 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 NFE2L1Q14494 772 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 NDUFA9Q16795 377 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ATP13A4Q4VNC1 1196 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 FAM91A1Q658Y4 838 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RBFAQ8N0V3 343 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC37A3Q8NCC5 494 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 OR7G2Q8NG99 324 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 OR2L8Q8NGY9 312 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CPB2Q96IY4 423 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 C8orf48Q96LL4 319 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RDH12Q96NR8 316 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TARS2Q9BW92 718 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RHOJQ9H4E5 214 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KCNN3Q9UGI6 736 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PCYT1BQ9Y5K3 369 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TRAPPC13A5PLN9 417 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RAB36O95755 333 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 FGF1P05230 155 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CSTF1Q05048 431 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF423Q2M1K9 1284 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CCDC58Q4VC31 144 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DACT2Q5SW24 774 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 FAM171A1Q5VUB5 890 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SPRYD7Q5W111 196 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DUPD1Q68J44 220 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 FAM199XQ6PEV8 388 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ACOT1Q86TX2 421 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 OR51D1Q8NGF3 324 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms