RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.57■■□□□ 1.522e-8■■□□□ 12.5
VEGFA-228ENST00000617771 C6orf15Q6UXA7 325 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-228ENST00000617771 MICALCLQ6ZW33 695 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 CLDN19Q8N6F1 224 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 EXD3Q8N9H8 876 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 ACVR1CQ8NER5 493 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 TRIM58Q8NG06 486 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 ELMO2Q96JJ3 720 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 RANBP9Q96S59 729 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 OR52A5Q9H2C5 316 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 RIMKLBQ9ULI2 386 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 ZKSCAN5Q9Y2L8 839 aa24.57■■□□□ 1.52
VEGFA-228ENST00000617771 CCDC162PA2VCL2 907 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 SFTPCP11686 197 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 ETS1P14921 441 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 ADRA1DP25100 572 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 STAT5AP42229 794 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 ACY1Q03154 408 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 PRKAA1Q13131 559 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 TUBB3Q13509 450 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 ZNF658BQ4V348 819 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-228ENST00000617771 LYPLAL1Q5VWZ2 237 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 DRICH1Q6PGQ1 229 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-228ENST00000617771 PACS1Q6VY07 963 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 UNC5BQ8IZJ1 945 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 CARFQ8N187 725 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 STAMBPL1Q96FJ0 436 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 CATSPER2Q96P56 530 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 FERD3LQ96RJ6 166 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 TTC1Q99614 292 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 CASS4Q9NQ75 786 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 RARRES3Q9UL19 164 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 RPS6KL1Q9Y6S9 549 aa24.56■■□□□ 1.52
VEGFA-228ENST00000617771 OR51F1A6NGY5 319 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 SPAG6O75602 509 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 KIAA0754O94854 1291 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 APRTP07741 180 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 ZNF28P17035 718 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 FOXN2P32314 431 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 HSD11B2P80365 405 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 MC1RQ01726 317 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 SIX1Q15475 284 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-228ENST00000617771 TSTD2Q5T7W7 516 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 BORAQ6PGQ7 559 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 AFTPHQ6ULP2 937 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 C4orf22Q6V702 233 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 NLRP9Q7RTR0 991 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 PRUNE1Q86TP1 453 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 BPHLQ86WA6 291 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-228ENST00000617771 OR4E2Q8NGC2 313 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 OR13J1Q8NGT2 312 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 MVB12BQ9H7P6 319 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 LNPEPQ9UIQ6 1025 aa24.55■■□□□ 1.52
VEGFA-228ENST00000617771 DRG1Q9Y295 367 aaKnown RBP24.55■■□□□ 1.52
VEGFA-228ENST00000617771 GOLGA6L3A6NEY3 463 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 F8W8V4 182 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 MATN2O00339 956 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 LIN7AO14910 233 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-228ENST00000617771 KALRNO60229 2985 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 FTH1P02794 183 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 GRIA1P42261 906 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 GLIS1Q8NBF1 620 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 GALNT6Q8NCL4 622 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 LCN9Q8WX39 176 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 HDAC10Q969S8 669 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 FCRL4Q96PJ5 515 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 SRMSQ9H3Y6 488 aa24.54■■□□□ 1.52
VEGFA-228ENST00000617771 B8ZZF3 427 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 ZBTB11O95625 1053 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 FGGP02679 453 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 MT-ND3P03897 115 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 OR56A5P0C7T3 313 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 FAM87AP0C7U9 286 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 FOLR1P15328 257 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 POLR2CP19387 275 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 PDHA2P29803 388 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 RPL22P35268 128 aaKnown RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 PREPP48147 710 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 KPNA2P52292 529 aaKnown RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 CCZ1BP86790 482 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 CCZ1P86791 482 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 KCNAB1Q14722 419 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 TMTC4Q5T4D3 741 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 CERS6Q6ZMG9 384 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 GSTA5Q7RTV2 222 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 D2HGDHQ8N465 521 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 PPHLN1Q8NEY8 458 aaKnown RBP24.53■■□□□ 1.52
VEGFA-228ENST00000617771 PEX13Q92968 403 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 TLR10Q9BXR5 811 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 TCAF1Q9Y4C2 921 aa24.53■■□□□ 1.52
VEGFA-228ENST00000617771 GOT2P00505 430 aaKnown RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 CCNYL3P0C7X3 344 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 EBLN1P0CF75 366 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 ZSCAN5DPP0CG00 497 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 PLA2G2AP14555 144 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 DLSTP36957 453 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 PPARGP37231 505 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 ARCN1P48444 511 aaKnown RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 PRAMEP78395 509 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 ACVR1Q04771 509 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms