RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PPM1HQ9ULR3 514 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 ANGPTL3Q9Y5C1 460 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 KIF26AQ9ULI4 1882 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 NR5A2O00482 541 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 MRASO14807 208 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 NUAK1O60285 661 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 ITGB7P26010 798 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 MSX2P35548 267 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 RPIAP49247 311 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 OGFOD2Q6N063 350 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 MILR1Q7Z6M3 343 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 PYDC1Q8WXC3 89 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 ELMO1Q92556 727 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 FAM129BQ96TA1 746 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 TMEM245Q9H330 911 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 ARL15Q9NXU5 204 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 PCDHGA7Q9Y5G6 932 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 HSFX4A0A1B0GTS1 333 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 HSFX3A0A1B0GWH4 333 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 EIF3FO00303 357 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 WNT9AO14904 365 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 INPP4BO15327 924 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 NRP2O60462 931 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 ANPEPP15144 967 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 XRCC1P18887 633 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 PSME3P61289 254 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 AP2B1P63010 937 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 HYAL1Q12794 435 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 RUNX3Q13761 415 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 ELAVL3Q14576 367 aaKnown RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 PLEKHS1Q5SXH7 462 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 FBXL19Q6PCT2 694 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 IL27RAQ6UWB1 636 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 LAYNQ6UX15 382 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 SPATA19Q7Z5L4 167 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 TMIEQ8NEW7 156 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC26A7Q8TE54 656 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 GLYATL1Q969I3 302 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 MRPL38Q96DV4 380 aaKnown RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 SDR39U1Q9NRG7 319 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-205ENST00000617641 GPR45Q9Y5Y3 372 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 MYO9BQ13459 2157 aa17■□□□□ 0.31
PCDHGC3-205ENST00000617641 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 K7EPI3 171 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 AP2A2O94973 939 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 ANXA5P08758 320 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 IDO1P14902 403 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 GJA4P35212 333 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 CTSCP53634 463 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 RPS6KA2Q15349 733 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 GSTA3Q16772 222 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 Q6ZSR9 355 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 CPA6Q8N4T0 437 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 ASB11Q8WXH4 323 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 TIFAQ96CG3 184 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 COQ10AQ96MF6 247 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 MYADMQ96S97 322 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 C1orf50Q9BV19 199 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC12A9Q9BXP2 914 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 S100A14Q9HCY8 104 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 PFDN4Q9NQP4 134 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 RIC8BQ9NVN3 520 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 DOCK8Q8NF50 2099 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 KRT87PA6NCN2 255 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 FKBP6O75344 327 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 C8GP07360 202 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 MPC1LP0DKB6 136 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 HMOX2P30519 316 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 IL12RB1P42701 662 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 FCHO2Q0JRZ9 810 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 SWT1Q5T5J6 900 aaKnown RBP16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 LRRC74BQ6ZQY2 392 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 RAVER1Q8IY67 606 aaKnown RBP16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 RASGEF1AQ8N9B8 481 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 JADE3Q92613 823 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 DTD2Q96FN9 168 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 VPS35Q96QK1 796 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 PARVBQ9HBI1 364 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 AIG1Q9NVV5 245 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 ADA2Q9NZK5 511 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 LRRK1Q38SD2 2015 aa16.99■□□□□ 0.31
PCDHGC3-205ENST00000617641 STK16O75716 305 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 MATN4O95460 622 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 BAG2O95816 211 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 GCKP35557 465 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 PIK3CGP48736 1102 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 ABRAXAS2Q15018 415 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 LDLRAP1Q5SW96 308 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 RETREG3Q86VR2 466 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 NRSN1Q8IZ57 195 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 SFRP1Q8N474 314 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 CCT7Q99832 543 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 HCN2Q9UL51 889 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 XIRP2A4UGR9 3374 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 E7ENX8 843 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 PSMD11O00231 422 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms