RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 EPN2O95208 641 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 EFNA1P20827 205 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR4D2P58180 307 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 DAG1Q14118 895 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 DSC3Q14574 896 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CHRNA6Q15825 494 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARL10Q8N8L6 244 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 MED8Q96G25 268 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 C1QTNF1Q9BXJ1 281 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SOX17Q9H6I2 414 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CACYBPQ9HB71 228 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 IGSF5Q9NSI5 407 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 OSER1Q9NX31 292 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTBP2Q9UKA9 531 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRSS51A0A1B0GVH4 220 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRR23AA6NEV1 266 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 POP4O95707 220 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPC1P35052 558 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 NEK2P51955 445 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 EMX2Q04743 252 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CAMK2GQ13555 558 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLLU1OSQ5K130 101 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF549Q6P9A3 640 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 BTN2A1Q7KYR7 527 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 DET1Q7L5Y6 550 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SNX20Q7Z614 316 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PLD3Q8IV08 490 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 HM13Q8TCT9 377 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 EZH1Q92800 747 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 BIRC7Q96CA5 298 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAELQ96JY0 434 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 C8orf4Q9NR00 106 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 B4GALT6Q9UBX8 382 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RAB23Q9ULC3 237 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 MRPS23Q9Y3D9 190 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPTBP11277 2137 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 MYO18BQ8IUG5 2567 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 COL4A5P29400 1685 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SCN1AP35498 2009 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 A0A1W2PRU2 124 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 LOC730098B7Z3J9 87 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 KPNA5O15131 536 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATXN8OSP0DMR3 200 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 HSD17B1P14061 328 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARSAP15289 507 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PBLDP30039 288 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 GKP32189 559 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RFC2P35250 354 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SOAT1P35610 550 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 HNF4AP41235 474 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 IST1P53990 364 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARSFP54793 590 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 AP1S2P56377 157 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 GTF2H2Q13888 395 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRP8Q14114 963 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPDYE7PQ495Y7 208 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 XKR6Q5GH73 641 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRRC73Q5JTD7 316 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 GTF2H2CQ6P1K8 395 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 XKR5Q6UX68 686 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 TPRG1Q6ZUI0 275 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 OTOP2Q7RTS6 562 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZBTB2Q8N680 514 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RANBP9Q96S59 729 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 FEM1AQ9BSK4 669 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 HTATIP2Q9BUP3 242 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RAD21L1Q9H4I0 556 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SUV39H2Q9H5I1 410 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARMC7Q9H6L4 198 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 IL26Q9NPH9 171 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 DFNA5O60443 496 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 B4GALT3O60512 393 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 IGLV3-25P01717 112 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC10A3P09131 477 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATXN1LP0C7T5 689 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF26P17031 533 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCNA2P20248 432 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CSKP41240 450 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 YAP1P46937 504 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 CDKN1CP49918 316 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPL26P61254 145 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 DAB2P98082 770 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR4D1Q15615 310 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SYVN1Q86TM6 617 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADCK1Q86TW2 530 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 PLD4Q96BZ4 506 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 TIFAQ96CG3 184 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 OSGEPL1Q9H4B0 414 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 POPDC3Q9HBV1 291 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 IFT80Q9P2H3 777 aaPredicted RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 GMPR2Q9P2T1 348 aaKnown RBP5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC25A13Q9UJS0 675 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 MYH4Q9Y623 1939 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRAV19A0A0A6YYK7 116 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 TULP3O75386 442 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 SBK3P0C264 359 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms